KEGG   Sinorhizobium medicae: Smed_4407
Entry
Smed_4407         CDS       T00555                                 
Name
(GenBank) phage SPO1 DNA polymerase-related protein
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
smd  Sinorhizobium medicae
Pathway
smd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:smd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Smed_4407
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smd03400]
    Smed_4407
Enzymes [BR:smd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     Smed_4407
DNA repair and recombination proteins [BR:smd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Smed_4407
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ABR63211
UniProt: A6UHT1
Position
pSMED01:complement(900219..900860)
AA seq 213 aa
MPRESAKLGPALAGEHAEAPTIASLRREAEGCERCDLYKNATQLVFGEGPTDARVVLVGE
QPGDREDLAGRPFVGPAGRLLDECMHEAGIDRSECYLTNAVKHFKFEPRGKRRLHSRPNA
GEVQACAWWLGAEIDELRPEIVVALGATALMSLLGRGVGVTKNRGQFVPAPGGFSVLVTI
HPSYLLRIRGRGDPEAERARFVDDLAKVAVRIG
NT seq 642 nt   +upstreamnt  +downstreamnt
atgccaagagaatccgccaaacttggcccagcgctcgcgggcgaacatgcagaggcaccg
acgattgcctccttacggcgggaggccgagggctgcgagcggtgtgacctctacaagaat
gccacgcagctggtcttcggcgaaggcccgaccgacgcccgcgttgtgcttgtcggggaa
cagcccggcgaccgggaggatctcgcggggcgcccgttcgtcgggcccgccgggcggctt
ctggacgagtgcatgcacgaagccggcatcgataggtcggaatgctatctgaccaatgcc
gtcaaacacttcaagttcgaaccgcgcggcaagcgccggctgcattcgcggccaaatgcc
ggcgaggtccaggcctgtgcctggtggctcggcgccgaaatcgatgagctccgccccgaa
atcgtcgttgcgctcggggccacggcgctgatgtcgctgctcggtcgaggcgtcggcgtc
acaaaaaaccgaggacagtttgtgccagcacccggcgggttctccgtgctcgtcacgatt
catccctcctatctgctgagaatccgcggcagaggcgaccccgaggcggaacgcgcccgt
ttcgtcgacgatctcgccaaagtagcggttcgaattggttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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