KEGG   Sinorhizobium medicae: Smed_5380
Entry
Smed_5380         CDS       T00555                                 
Name
(GenBank) P-type conjugative transfer protein TrbJ
  KO
K20266  type IV secretion system protein TrbJ
Organism
smd  Sinorhizobium medicae
Pathway
smd02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:smd00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Smed_5380
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:smd02044]
    Smed_5380
Secretion system [BR:smd02044]
 Type IV secretion system
  Trb secretion system protein
   Smed_5380
SSDB
Motif
Pfam: DUF2749 Leptin Spc29 Fib_alpha
Other DBs
NCBI-ProteinID: ABR64149
UniProt: A6UKG9
Position
pSMED02:346636..347436
AA seq 266 aa
MPQRYSKNSWFAGSMVASMTIVAALPVHAGTATGAATEWTQVLNNAELVSLVGQSGEQIQ
NQLTKISQLSQQIETQLNIYRNLLQNTAALPSHMWGQVENDLNRLRSIVDQGQSIAFSMG
NADDVLQQRFASYADLRTNLPANETFSATYQTWSDTNRDTIASTLKAASLTADQFESEES
AMSSLRSMSETADGQMKALQIGHQIAAQQVAQMQKLRGLVSQQMTLMGTWLQTEQTDKDL
AQARREKFFRAEVKSIPEGQKMEPRW
NT seq 801 nt   +upstreamnt  +downstreamnt
atgccgcagcgatactcaaaaaatagttggttcgctggttccatggtcgcttcgatgaca
atcgtcgctgccctgccggttcacgccggcacggctaccggtgcggcaacggagtggacg
caagtactcaacaacgcagaactggtgtcccttgtaggtcaatctggtgagcaaattcag
aaccaactcaccaagattagccagctatcccaacagatcgaaacacagctgaacatctat
cggaatctgctgcagaacacggccgccctgccatcgcacatgtgggggcaggtcgagaac
gatctcaatcggctccgtagcatcgtcgaccaagggcagagcatagccttctcgatgggc
aatgctgacgatgtgctgcagcagcggtttgcaagctatgccgacctaagaacaaacctg
ccggccaatgagacgttctccgcgacctatcaaacctggtcggacaccaaccgcgacacg
atcgccagcacgttaaaggcggcaagtctcacggccgatcagttcgagagcgaggaaagc
gcaatgtcctcccttcggtcaatgtccgaaacggcggatggccagatgaaggcgctgcag
atcggacaccagatcgccgctcagcaggtggcgcagatgcagaagcttcgcggtctcgtc
tcacaacagatgacgctaatgggaacctggctacagaccgagcagaccgataaggatctg
gctcaggcgaggcgggaaaagttcttcagagccgaggtgaagagtattccggaggggcag
aagatggagccccgctggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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