KEGG   Sinorhizobium medicae: Smed_6158
Entry
Smed_6158         CDS       T00555                                 
Name
(GenBank) putative virB5 gene
  KO
K03200  type IV secretion system protein VirB5
Organism
smd  Sinorhizobium medicae
Pathway
smd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:smd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Smed_6158
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:smd02044]
    Smed_6158
Secretion system [BR:smd02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   Smed_6158
SSDB
Motif
Pfam: DUF4141 TraI_C ElaD-SseL-like_C
Other DBs
NCBI-ProteinID: ABR64784
UniProt: A6UMA4
Position
pSMED02:complement(1082508..1083191)
AA seq 227 aa
MKFTQLTVTTIAACLIMQAPARAQFVVTDPGNTYQAAITAGTTILNYAKTAQMLEQTIAM
VGMFTTNFAVTGLLSQINQGNKYPSTNKLSEQMFDSQRPVSATARAIATDRDRAIDGSDA
HAELLRGQITGAANAASVAADNLELMDKRLRENGNTLGQLSRSRNIMQATVTNGLLLKQI
HDAIIQNSQATSLLTMATAQASLHAAEEAAAQRRERLETAKIFSPGL
NT seq 684 nt   +upstreamnt  +downstreamnt
atgaaatttacccaactgacagtaacgactattgccgcttgccttattatgcaggccccg
gcccgagcgcagttcgttgtcaccgaccccggaaatacatatcaggcagcgatcactgct
ggtaccactattctgaactatgcgaagacagcacagatgctcgaacagacgattgcgatg
gtggggatgtttacaacgaacttcgcagtcaccggcctgttgagccaaatcaaccagggg
aataagtacccctcgacgaataagctaagcgagcagatgtttgacagtcagaggccagtc
tcggccacagcacgcgctatcgcaacggaccgcgatcgcgcaatcgatggcagcgacgca
catgcagagttgctccgtgggcagatcaccggtgctgctaatgccgcgagtgttgcagcc
gacaatctcgagttgatggacaagcgcctccgcgaaaatggcaacacgcttggtcagctg
tcgcgttcaaggaacattatgcaggcaactgtaacaaacggattgcttctcaaacagatt
cacgacgcaatcatccagaacagccaggctacgagtctgctgacgatggccactgcacag
gccagcctccacgctgcagaggaggccgccgcccagcgacgagaacgcctggaaaccgcg
aaaatcttcagccccggactatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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