KEGG   Sinorhizobium meliloti 1021: SMc01237
Entry
SMc01237          CDS       T00058                                 
Symbol
nrdJ
Name
(GenBank) Vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
sme  Sinorhizobium meliloti 1021
Pathway
sme00230  Purine metabolism
sme00240  Pyrimidine metabolism
sme01100  Metabolic pathways
sme01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:sme00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    SMc01237 (nrdJ)
   00240 Pyrimidine metabolism
    SMc01237 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sme03400]
    SMc01237 (nrdJ)
Enzymes [BR:sme01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     SMc01237 (nrdJ)
DNA repair and recombination proteins [BR:sme03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    SMc01237 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TACO1_YebC_N Acetyltransf_11 Ribonuc_red_lgN Tnp_DNA_bind
Other DBs
NCBI-ProteinID: CAC46134
RhizoBase: SMc01237
UniProt: Q92Q05
Position
complement(1681005..1684796)
AA seq 1263 aa
MKIERRFTKAGQSAYAEIEFRKATSEIKNPDGSVVFRLADIDVPAQFSQVAADILAQKYF
RKAGVPAKLKRVEENDVPSFLWRSVPDNDALKALPKEEQYGSETDARQVFDRLAGTWAYW
GWKGGYFDTEEDASAFRDELAYMLATQRVAPNSPQWFNTGLHWAYGIDGPGQGHFYVDPF
TGKLTKSKSAYEHPQPHACFIQSVADDLVNEGGIMDLWVREARLFKYGSGTGSNFSHLRA
EGERLSGGGKSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDIDHPDIEEYINWKVKE
EQKVAALVTGSKIVAKHLKAIMKACINCDGSDDACFDPKQNPALKREIRAAKQALVPENY
VKRVIQFARQGYKDIQFKTYDTDWDSEAYLTVSGQNSNNSVSIKDDFLRAVEADGDWHLT
ARKDGRVMKTLKARDLWESISHAAWASADPGLHFNTTMNDWHTCPAAGPIRASNPCSEYM
FLDDTACNLASLNLMQFKDAATKRINIGDYEHAVRLWTVVLEVSVMMAQFPSREIAELSY
EYRTLGLGYANIGGLLMSSGIPYDSPEGRAIAGALTAIMTGVAYATSAEISAKLGPFPGF
APNRDNMLRVMRNHRRAAHGETAGYEGLSVNPVALVHGDCPDQDLIAHAKGAWDKAVELG
EKHGYRNAQATVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRAVPEALR
TLGYSESQIAEMEAYAVGHGNLNQAPAINPTTLKAKGFTDEKIEAVNAALKAAFDIKFVF
NQWTLGADFLKETLKVSDEQLASMDFNLLEHLGFSRKDIEAANIHVCGAMTLEGAPFLKA
EHLPVFDCANPCGKIGKRYLSVESHIRMMAAAQPFISGAISKTINMPNEATVEDCKNAYM
LSWKLALKANALYRDGSKLSQPLNASLIEDEEDEDAIEELMQAPAAAQAVAVTEKIIERV
IEKVVRAREKLPNRRQGYTQKAIVGGHKVYLRTGEFGDGRLGEIFIDMHKEGAAFRAMMN
NFAIAISLGLQYGVPLEEYVEAFTFTKFEPAGMVQGNDAIKNATSILDYVFRELAVSYLG
RHDLAHVDTSDFSNTALGRGIQEGKTNLVSTGWTRGYKPSIVGGTGERSEPKGASTAAPA
RASAGASVTSISGNAVRKLEPAIAAATSEVVAFKRDYEERAVELAEEIAEEAEQEVTALF
SDKAAAEAAAAKSEAKKVEAERRARSIMQGYTGNMCSECQNFTMVRNGTCEKCDTCGATS
GCS
NT seq 3792 nt   +upstreamnt  +downstreamnt
atgaagatcgagcgccgtttcacgaaggcagggcaatccgcctatgccgagattgagttc
cgcaaggcgacgagtgagatcaagaacccggacgggtcggtggtcttccgccttgcggat
atcgacgtgccggcgcagttctcgcaggtcgccgccgatattctcgcccagaaatatttc
cgcaaggccggtgtgccggcaaagctgaagcgtgtcgaggaaaacgacgtgccgtccttc
ctctggcgctcggttccggacaacgacgcgctgaaggcgctgccgaaggaagagcagtac
ggctccgaaaccgatgcccgccaggttttcgatcgcctggccggcacctgggcctattgg
ggctggaagggcggctatttcgacacggaagaggacgccagcgccttccgcgacgagctc
gcctacatgctcgccacccagcgcgttgctccgaactcgccgcaatggttcaacaccggc
ctccactgggcctatggcatcgacggccccggccagggccatttctacgtcgatcccttc
accggcaagctgacgaagtcgaagtccgcttacgaacacccgcagccgcacgcctgcttc
attcagtcggtcgcggacgacctcgtcaacgagggcggcatcatggatctctgggtgcgt
gaggcgcgcctcttcaaatacggctccggcaccggctccaacttctcgcatctgcgcgcc
gaaggcgaaaggctctcgggcggcggcaagtcctccgggctcatgagcttcctgaagatc
ggcgaccgcgccgcgggcgccatcaagtcgggcggcacgacgcgccgcgccgccaagatg
gtcgtcgtcgacatcgaccatcccgacatcgaggaatacatcaactggaaggtcaaggaa
gagcagaaggtcgccgccctcgtcaccggctccaagatcgtcgccaagcacctgaaggcg
atcatgaaggcctgcatcaattgcgacggcagcgacgatgcctgcttcgatcccaagcag
aacccggcgctgaagcgcgagatccgtgccgccaagcaggcgctggttccggaaaactat
gtcaagcgcgtcatccagttcgcgcggcagggctataaggacatccagttcaagacctat
gacacggattgggattcggaggcctatctcacggtttccggccagaactccaacaactcg
gtctcgatcaaggacgacttcctgcgcgccgtggaggcggatggcgattggcacctgacc
gcccgcaaggacggccgcgtcatgaagaccctgaaggcgcgcgacctctgggagtcgatc
tcccacgcggcctgggcctcggccgatccgggcctgcacttcaacacgacgatgaacgac
tggcacacctgcccggctgcaggcccgatccgcgcctccaacccgtgctcggaatacatg
ttcctggacgacacggcctgcaatctcgcctcgctcaacctgatgcagttcaaggatgcc
gcgaccaagcggatcaatatcggcgactacgagcatgccgtccgtctctggaccgtcgtt
ctcgaagtctctgtgatgatggcgcagttcccgtcccgcgagatcgccgagctctcctac
gaataccgcacgctcggcctcggctatgcgaatatcggcggcctgctgatgtcgtcaggc
attccctacgactcgcccgagggccgcgccatcgccggcgcgctgaccgcgatcatgacc
ggcgtcgcctatgccacctcggccgagatctccgcaaagctcggccccttccccggcttt
gcgccgaaccgcgacaacatgctgcgcgtcatgcgcaatcaccgccgcgcggctcacggc
gagaccgccggttatgagggcctgtccgtcaacccggtcgcgctcgtccacggcgactgc
ccggaccaggatctgatcgcccatgccaagggcgcctgggacaaggcggtcgagctcggc
gagaagcacggctaccgcaacgcccaggccaccgtgatcgcgccgaccggtacgatcggg
ctcgtcatggattgcgacacgaccggcatcgagcccgatttcgccctggtgaaattcaag
aagctcgccggcggcggctatttcaagatcatcaaccgcgcggttcccgaggcgttgcgc
acgctcggctactcggaaagccagatcgccgagatggaggcttatgccgtcggccacggt
aacctcaaccaggccccggccatcaatcccacgacgctcaaggccaagggcttcaccgac
gagaagatcgaagccgtcaatgcggcgcttaaggctgccttcgacatcaagttcgtcttc
aaccagtggacgctcggcgccgacttcctgaaggagacgctgaaggtcagcgatgagcag
ctcgcctcgatggacttcaacctgctcgagcatctgggcttctccaggaaggacatcgaa
gccgccaacatccatgtctgcggcgcgatgacgctcgaaggggcaccgttcctgaaagca
gagcacctgccggtcttcgattgcgccaatccctgcggcaagatcggcaagcgctacctc
tcggtcgaaagccatatccgcatgatggcggccgcccagcccttcatttcgggcgcaatc
tccaagacgatcaacatgccgaacgaggcgaccgtcgaggattgcaagaacgcctacatg
ctctcctggaagctcgcgctgaaggcgaatgcgctctaccgcgacggttccaagctctcg
cagccgctgaacgcctcgctgatcgaggacgaggaagacgaggacgcgatcgaggagctg
atgcaggcgccggcagccgcccaggcggtcgccgtcaccgagaagatcatcgagcgcgtc
atcgagaaggtggtgcgcgcccgcgagaaactgccgaaccgccggcagggctatacccag
aaggcgatcgtcggcggccacaaggtgtatctgcgcaccggcgaattcggcgatggacgg
ctcggcgagatcttcatcgacatgcacaaggaaggtgcggccttccgggcgatgatgaac
aacttcgccatcgccatctcgctcggcctgcaatatggcgtgccgctcgaggaatatgtg
gaggccttcaccttcaccaagttcgagccggccggcatggtccagggcaacgacgcgatc
aagaacgcgacgtcgatcctcgactatgtcttccgcgagcttgccgtttcctatctcggc
cgccacgaccttgctcacgtcgacacctccgacttcagcaataccgcgctcggccgcggc
attcaggaaggcaagaccaacctcgtctccaccggctggacccgcggctacaagccgtcc
atcgtcggcggcaccggcgagcgctccgaaccgaagggtgcgtcgacggccgccccggcc
cgcgcctcggccggcgcttccgtaacctcgatctccggcaatgccgtgcgcaagctggag
ccggcaatcgccgccgccacttccgaagtcgtcgccttcaagcgcgattacgaggaacga
gccgtcgaactcgccgaggagattgccgaagaggcggaacaggaggtgactgccctcttt
tccgacaaggccgcggcagaggccgctgcggcgaagtccgaggcaaagaaagtcgaagcc
gaacgccgcgcccgctcgatcatgcagggctataccggcaacatgtgctccgagtgccag
aacttcacgatggtcaggaatggcacgtgcgagaagtgcgacacatgcggcgccacgagc
gggtgcagctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (47)   

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