KEGG   Sinorhizobium meliloti GR4: C770_GR4Chr0379
Entry
C770_GR4Chr0379   CDS       T02405                                 
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
smeg  Sinorhizobium meliloti GR4
Brite
KEGG Orthology (KO) [BR:smeg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smeg03021]
    C770_GR4Chr0379
Transcription machinery [BR:smeg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     C770_GR4Chr0379
SSDB
Motif
Pfam: DUF6596 Sigma70_r2 Sigma70_r4_2 TPR_21 Sigma70_ECF TPR_9 Sigma70_r4
Other DBs
NCBI-ProteinID: AGA05355
Position
397031..398302
AA seq 423 aa
MTDTGWIDLALVSARPQAMGALLRYFRNLDLAEEAFQEACIRALKNWPRTGPPRDPAAWL
IFVGRNSGIDKVRRQSRETALPPEELLSDLDDRESELADRLDGAHYRDDILRLLFVCSNP
ALPATQQIALALRIVSGLSVRQIARAFLVSEAAMEQRITRAKARVAAAGIPFETPDAVDR
AERLAAVATMIYLVFNEGYSAMNGPEGVSADLCDEAIRLSRLLLRLFPAEPEMMGLTALL
LLQHSRARARFDANGAVVLLEDQDRRLWSRPMITEALAMIDKAMRHRRPGPYQIQAAIAA
LHARAERPEQTDWEEIDLLYQALERLQPSPVVTLNRAVAVSKREGPEAALAMVEPLGERL
SGYFYYHGLRGGLLKQLGRACEARTAFDRAIALATNASEAAYIRMQLDHLAAEPATVAEE
EKR
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgaccgacacaggctggatcgatcttgctcttgtttccgcgcggccgcaggcaatgggt
gcgctgctgcgttactttcgcaatctcgatctggcggaggaggcgttccaggaggcctgt
atccgtgcgctgaaaaactggccccgcaccggtccgccgcgcgatcccgccgcctggctc
atcttcgtcggccgcaacagcggcatcgacaaggtgcggcggcagtcgcgcgagacggca
ctgccgccggaggaactgctctccgatctcgacgaccgggagagtgaactcgccgatcgc
ctcgacggggcgcattaccgcgacgacatcctgcggctgctcttcgtctgcagcaacccg
gcgcttccggcaacccagcagatcgcgcttgcactgcgcatcgtatcggggctctccgtc
aggcagatcgcccgtgcctttctcgtcagcgaagcggcgatggagcagcgcatcacccgc
gccaaggcccgcgtcgcagccgccggcatcccgttcgagacacccgatgccgtcgatcgc
gccgagcggctcgcagcggtcgcgacgatgatctaccttgtcttcaacgagggctattcg
gcgatgaacggccccgagggcgtctccgccgatctttgcgacgaggcgatccgcctgtcg
cggctgctgctgcggctgtttcccgccgagccggaaatgatggggctgacggcgcttctg
ctgctccagcattcgcgcgcccgcgcgcgcttcgatgccaatggtgccgtcgtcctgctc
gaagatcaggatcggcggctctggagccggccgatgatcaccgaggcgctggcgatgatc
gacaaagcaatgcgccatcgccgccccggtccctaccagatacaggcagcaatcgcggcc
ctgcatgcccgcgccgaacgtccggagcagacggattgggaggagatcgacctcctctac
caggcgctcgagcgcctgcagccctcgccggtcgtcacgctcaatcgcgcggtcgcggtc
tcgaaacgcgagggaccggaggccgcactggcgatggtggagccccttggggagaggctt
tccggctatttctattatcacggcctgcgcggcggccttttgaagcagctcggccgggca
tgcgaggcgcgcaccgccttcgaccgggcgatcgcactggccaccaacgcgtccgaagcg
gcctatatccgcatgcagctcgatcacctcgcggccgagccggcgacggtcgcggaagaa
gaaaagcgataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (13)   

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