KEGG   Sinorhizobium meliloti GR4: C770_GR4Chr3305
Entry
C770_GR4Chr3305   CDS       T02405                                 
Name
(GenBank) 2-5 RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
smeg  Sinorhizobium meliloti GR4
Brite
KEGG Orthology (KO) [BR:smeg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smeg03016]
    C770_GR4Chr3305
Enzymes [BR:smeg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     C770_GR4Chr3305
Transfer RNA biogenesis [BR:smeg03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    C770_GR4Chr3305
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: AGA08190
Position
complement(3464303..3464890)
AA seq 195 aa
MPRLFTALEIPRNAAMSLSLLRGGLPGARWIDVENYHITLRFIGDVDWRTADEIIDRLDR
IERPEFQLQLSGTGAFGSKKPHSVWAGVSIAPEMFALQAEIERICQRIGLPSDPRKFTPH
VTLARLRSSRVEDVVEYLSGRGNFVTAPFTVSRFVLLSSRDSVGGGPYLTEEVFPLHEER
SNLASNEEHPASSVW
NT seq 588 nt   +upstreamnt  +downstreamnt
atgccgagactgttcaccgccctcgaaattccgcgcaatgcagcaatgagtctttccttg
ctgcgcggaggtcttcccggagctcgctggatcgatgtggagaattatcacatcacgctc
cgcttcatcggcgacgtcgactggcgaaccgccgacgagatcatcgacagacttgaccgc
atcgaacggcccgagtttcagctgcagctgtcgggcaccggcgccttcggctccaagaaa
ccgcattccgtctgggccggcgtcagcatcgctcccgaaatgttcgccctgcaggccgaa
atcgagcgcatctgccagcgcatagggctgccctcggatccgcgcaagttcaccccgcat
gtgacgctggcgcgcctgcgctcctcgcgcgtcgaggatgtcgtcgaatatctctccggg
cgcggcaatttcgtcaccgctcccttcaccgtctcccgtttcgtgctcctgtcgtcacgc
gactcggtcggcggcggcccgtatctcacggaagaggtcttcccgcttcacgaagagcgc
tcgaacctcgcgagcaacgaggagcatcctgcttcgagcgtctggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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