KEGG   Sinorhizobium meliloti 2011: SM2011_a0143
Entry
SM2011_a0143      CDS       T02497                                 
Symbol
rpoE6
Name
(GenBank) RNA polymerase ECF sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
smel  Sinorhizobium meliloti 2011
Brite
KEGG Orthology (KO) [BR:smel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smel03021]
    SM2011_a0143 (rpoE6)
Transcription machinery [BR:smel03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SM2011_a0143 (rpoE6)
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF DUF134 HTH_23 HTH_24 Xre-like-HTH DUF6456
Other DBs
NCBI-ProteinID: AGG69761
Position
pSymA:78634..79176
AA seq 180 aa
MSNAVKDVGERLMAFLPNLRRFAISLCGSRDVADDLVQSACERALASAERFEPGTRFDAW
IFRILRNLWIDQVRRQKTAGVQDDITERHDIAGSSGERETEARLTLKTVAEAITELPDEQ
REVVLLVCVEELSYREAADVMGIPIGTVMSRLMRARRSLAEAAGITQATGRSQSMKGANE
NT seq 543 nt   +upstreamnt  +downstreamnt
atgagcaatgcggtgaaagatgtcggcgaacgcctcatggcgttcctgcccaatctgcgc
cgcttcgccatctcgctctgcggctcgcgtgatgttgccgatgatctcgtgcagtcggcc
tgcgagcgggcactcgccagtgccgagcgcttcgagccgggcacgcgctttgatgcttgg
atattccgtatcctgcgcaatctctggatcgaccaggtgcgccgacagaagaccgcaggc
gtgcaggacgatatcaccgagcgtcatgacatcgccggttcatctggcgagcgtgaaacc
gaagcgcggctgaccctcaagaccgtcgcggaggcgatcaccgaattgccggacgagcag
cgggaggtggttcttctggtctgcgtcgaggagctatcctatcgcgaagcggccgatgtg
atgggcattccaatcggtacggtcatgagccgactgatgagggcacgcaggagtttggcc
gaggctgccggaataacacaggcgaccggacgttctcagtcaatgaagggcgcaaacgaa
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (15)   

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