KEGG   Sinorhizobium meliloti 2011: SM2011_c00622
Entry
SM2011_c00622     CDS       T02497                                 
Symbol
rnd1
Name
(GenBank) putative ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
smel  Sinorhizobium meliloti 2011
Brite
KEGG Orthology (KO) [BR:smel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smel03016]
    SM2011_c00622 (rnd1)
Enzymes [BR:smel01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     SM2011_c00622 (rnd1)
Transfer RNA biogenesis [BR:smel03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    SM2011_c00622 (rnd1)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-ProteinID: AGG73772
Position
complement(1296725..1297876)
AA seq 383 aa
MIQTTADLEAACRELARSSYITIDTEFLRETTFWPVLCLIQMASPEMAVIVDPMAPGIDL
APFFALMSNPDVVKVFHAARQDIEIIHHLGNLIPHPIFDTQVAAMVCGFGDSVSYDQLVN
RIKNEQIDKSSRFTDWSRRPLTDKQLDYALADVTHLRDIYQYLTKELDREGRSSWLAEEM
AILESRETYDLHPDNAWQRLKMRVKKPIELAVLQKVAAWREREARARNVPRGRIIKDDAI
YEIAQQQPKDAEALGRLRTIPKGWERSSAGTALIEAVGEALAIPRGELPRLPRQNHAPEG
AAAASELLKVLLKLISEKEGVAAKIIANSDDLDRIAAEGEGADVAALKGWRRELFGMTAL
KLINGEVALRFVDKKVEAMEIGG
NT seq 1152 nt   +upstreamnt  +downstreamnt
atgattcaaacgacagcagatcttgaggccgcctgccgagagctggcccgttcaagctat
attacgatcgatacggagttcctgcgcgaaaccacgttctggccggtgctgtgcctcatt
cagatggcaagcccggaaatggcagtgatcgtcgatccgatggcacccgggatcgacctc
gccccgttcttcgcgctgatgagcaacccggatgtcgtgaaggtgttccacgccgccagg
caggacatcgagatcatccaccatctcggaaatctcattcctcatccgatcttcgatacg
caggtggccgcgatggtttgcggcttcggtgacagcgtgtcctatgaccagctcgtcaac
cgcatcaagaacgagcagatcgacaagtcgtcccgcttcaccgattggagccgcagaccg
ctcaccgacaagcagctcgactatgcgctggcggacgtgacgcatctgagggatatctac
cagtacctcaccaaggaactggatcgcgagggacgctcctcatggcttgcggaggaaatg
gcgatcctcgaaagccgggagacctacgatctccacccggacaatgcctggcagcggctg
aagatgcgggtgaagaaacccatcgagctcgccgtcctgcagaaggtggcggcgtggcgc
gaacgcgaagcgcgcgcccgcaacgtgccgcgcgggcgaattatcaaggatgatgcgatc
tatgagattgcgcagcagcagccgaaggatgccgaggcgctcggacgcctcaggaccatt
cccaagggctgggagcgctccagcgcggggacggccctcatcgaggcagtcggcgaagcc
cttgcgatcccgaggggcgagctgccgcgcctgccgcgccagaaccacgcacccgagggc
gctgcggcggcgagcgagctgctcaaggtgctgctgaaactcatctccgaaaaggaggga
gtcgcggccaagatcatcgccaacagcgacgatctcgacaggatcgcagccgagggcgaa
ggtgcggacgtcgccgcgctcaagggctggcggcgtgagctcttcggcatgacggcgctg
aaactcatcaacggcgaggtggcattgcgcttcgtcgacaaaaaagtcgaggcgatggaa
atcggcggttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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