KEGG   Sinorhizobium meliloti 2011: SM2011_c04051
Entry
SM2011_c04051     CDS       T02497                                 
Symbol
rpoE4
Name
(GenBank) Putative RNA polymerase sigma-E factor (sigma-24) protein
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
smel  Sinorhizobium meliloti 2011
Brite
KEGG Orthology (KO) [BR:smel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smel03021]
    SM2011_c04051 (rpoE4)
Transcription machinery [BR:smel03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SM2011_c04051 (rpoE4)
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF DUF134 Xre-like-HTH
Other DBs
NCBI-ProteinID: AGG75423
Position
complement(3054779..3055315)
AA seq 178 aa
MSGIMRSRVERRLEPHYARLFAYAVALSRDRDGAQDIFQECIARALDARSVPETEPAFRA
WLFAILRNIWIDQSRLRRRRSDLEQEFVTDLVPAPVAPETVLVDAFSVRQAFTRLSTEHR
EILALVDISGFSYEEVAMMIAVPKGTVMSRVSRARRALASYLGDANVVELARHREGRK
NT seq 537 nt   +upstreamnt  +downstreamnt
atgtcgggtatcatgcgctcgcgcgttgaacggagactggaaccgcattatgcgcggctt
ttcgcttatgccgtcgcgctttcgcgcgatcgcgacggagcacaggatattttccaggag
tgcatcgcccgcgccttggatgcgcgaagcgtgcccgaaacggagcccgcatttcgtgca
tggctcttcgcgatccttcggaacatctggatcgaccagtcgcgcctgcgccgccggcgt
tccgacctggaacaggagttcgtcacggacctggtgcccgcgccggtcgccccggaaacc
gtgctggtcgatgcattttcggtccgccaggcgtttacccgcctcagcaccgagcatcgc
gaaatcctcgcgctggtcgacatatccggtttcagctacgaggaggtggcaatgatgatc
gcagtgcccaagggtaccgtcatgagccgggtcagccgtgcaaggcgggcgctggcgtct
tacctcggcgatgccaatgtcgtcgaactcgcgcggcatcgagaaggccgaaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

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