KEGG   Sinorhizobium meliloti RMO17: DU99_01190
Entry
DU99_01190        CDS       T03395                                 
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
smer  Sinorhizobium meliloti RMO17
Pathway
smer03030  DNA replication
smer03430  Mismatch repair
smer03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:smer00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DU99_01190
   03430 Mismatch repair
    DU99_01190
   03440 Homologous recombination
    DU99_01190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smer03032]
    DU99_01190
   03400 DNA repair and recombination proteins [BR:smer03400]
    DU99_01190
Enzymes [BR:smer01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DU99_01190
DNA replication proteins [BR:smer03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DU99_01190
DNA repair and recombination proteins [BR:smer03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DU99_01190
SSDB
Motif
Pfam: DNA_pol3_gamma3 DUF3646 DNA_pol3_delta2 AAA AAA_22 AAA_16 AAA_30 AAA_5 AAA_14 AAA_19 AAA_24 RuvB_N AAA_18 SKI TsaE SRP54 DUF815 Rad17 AAA_assoc_2 AAA_28 CbiA nSTAND3 RNA_helicase AAA_2 AAA_17 AAA_7
Other DBs
NCBI-ProteinID: AIL98072
UniProt: A0AA91ABC1
Position
256031..257911
AA seq 626 aa
MSDEAPTSSPILPVEKPAAYRVLARKYRPKDFSDLMVGQEPMVRTLTNAFETGRIAQAYM
LTGVRGVGKTTTARILARALNYKTAEIDKPTIDLRVPGEHCQAIMDGRHVDVIEMDAASH
TGIDDIREIIEQVRYRPVSARYKVYIIDEVHMLSTQAFNGLLKTLEEPPEHVKFIFATTE
IRKVPITVLSRCQRFDLRRISASDLVGLFSTILGKEGVPFDPEALAMVARAAEGSARDGL
SLLDQAIAHGGGSVEIETVRSMLGLADRARIVDLFEHVIKGDVAGALDEFAAQYEAGANP
TVVLTDLADFTHLVTRLKYVPDAVNDQSLSEIERTRGAEFAGSVAVTTLSRVWQMLLKGI
PEAESSARPAGAAEMVLIRLAHAAHLPSPEEAARRLLDLSGGEGGGRPAPNGGGGGGGAQ
APAGTPVEARAVETAVSRPSGNGATMLRAVPSSAPPQPISVGRIEERTVASAAAKPEPKV
PVNSIGDIADLCAKNRDIKLKTMVRGFLRLVHIEPGRLDVNLPDDAPKTLLNELAVKLKE
WTGIHWVVSYSREQGEPTLVEAEQRAQEQRVNDARQDPDVAAILARFPGARITDVRIRAA
EEELESLAPAAAESEDGDIVPDDDIE
NT seq 1881 nt   +upstreamnt  +downstreamnt
atgagcgacgaagcgcccacttcatccccgattttacccgtcgagaaaccggccgcctac
cgtgttctggcgcgcaaataccgccccaaggacttctccgacctgatggtcggccaggag
ccgatggtgcgcacgctcaccaacgccttcgaaaccggccgcatcgcccaggcctacatg
ctgaccggcgttcgcggcgtcggcaagacgacgacggcgcgtatcctggcacgggcgctg
aactacaagaccgccgagatcgacaagcccaccatcgacctgcgcgtccccggcgaacat
tgccaggcgatcatggacggccgccatgtcgacgtgatcgagatggacgccgcctcgcat
accgggatcgacgatatccgcgagatcatcgagcaggtacgctatcggccggtctccgcg
cgctacaaggtctatatcatcgacgaagtgcacatgctctcgacgcaggccttcaatggc
ctgctgaagacgctcgaagagccgccggagcatgtgaagttcattttcgccacgaccgaa
atccgcaaggttccgattaccgtcctgtcgcgctgccagcgcttcgatctccggcgcatc
agcgcttccgatctggtcggcctcttctccaccattctcggcaaggagggcgtgcccttc
gatccggaggcgctggcgatggtggcgcgggcagcggaaggctcggcgcgcgacggcctg
tcgctgctcgatcaggcgatcgcccatggcggcggttcggtcgagatcgaaaccgtgcgc
tcgatgctcggccttgccgatcgggcgcggatcgtcgacctgttcgagcatgtcatcaag
ggcgatgtcgccggcgcgctcgacgagttcgccgcgcaatacgaagccggcgccaatccg
accgtggtcctcaccgaccttgccgacttcacccacctcgtgacaaggctgaaatatgtg
ccggacgcggtcaacgaccagtcgctgagcgagatcgagcgcacgcgcggggccgaattc
gccggcagcgttgccgtgacgacgctttcgcgcgtctggcagatgttgctcaagggcatt
cccgaggcggagagctctgcgcgccccgcaggtgctgccgagatggtgctgatcaggctc
gcccatgccgcccatctgccttcgcccgaagaggccgcgcggcggcttctcgatctttcg
ggcggcgaaggcggcggtcgcccggccccgaacggcggtggtggcggcggcggtgcgcag
gcgcctgcaggcacccccgtcgaggctcgcgccgtggagacggcagtctcgcgtccaagc
ggtaatggcgcgaccatgctgcgcgccgtgccgagctccgcgccgccccagccgatcagt
gtcggccgcatcgaagagcgcacggtcgcgagcgccgctgcgaaacccgaaccgaaggtt
cccgtcaattccatcggcgacatcgctgatctctgcgccaagaatcgcgacatcaagctg
aagacgatggtgcgcggtttcctgaggctcgtgcatatcgaacccggccggctcgacgtc
aatctgcccgacgacgcaccgaagacgctgctgaacgaactcgccgtcaagctcaaggaa
tggacgggtatccattgggtcgtgagctacagtcgggagcagggcgagccgacccttgtc
gaggcagagcagcgcgcgcaggagcagcgcgtcaacgatgcgcgccaggacccggacgtc
gctgccattcttgcgcgctttcccggggccaggatcaccgacgtgcgcatccgcgcggcg
gaagaggagctcgagagcctcgctccggccgcggccgaatccgaggacggcgacatcgtc
ccggacgacgacatcgagtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (39)   

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