KEGG   Sinorhizobium meliloti RMO17: DU99_06725
Entry
DU99_06725        CDS       T03395                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
smer  Sinorhizobium meliloti RMO17
Pathway
smer03030  DNA replication
smer03430  Mismatch repair
smer03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:smer00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DU99_06725
   03430 Mismatch repair
    DU99_06725
   03440 Homologous recombination
    DU99_06725
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smer03032]
    DU99_06725
   03400 DNA repair and recombination proteins [BR:smer03400]
    DU99_06725
Enzymes [BR:smer01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DU99_06725
DNA replication proteins [BR:smer03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DU99_06725
DNA repair and recombination proteins [BR:smer03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DU99_06725
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DUF655 HROB
Other DBs
NCBI-ProteinID: AIL99112
Position
1390610..1394119
AA seq 1169 aa
MTGNQGIGQGIGHGTGAAADPQFVHLRVHSAYSLLEGALPLKKIIGKAVADDQPAIGIAD
TNNLFAALEFSQKAADDGLQPIIGCQLSIDMEDEAEGERRGHAHQFVKLPAIVLIAATED
GYARLVELVSRAYLEGEGHQQTRISRSWLAAGGTTGLIALTGAGAGPVDMALKSGSPALA
EARLKALIELFGDRLYVELQRHGNYDRRHENRMIDLAYRLDIPLVATNEAFFPSPSDYDA
HDALMAVAHNAMVSDDSRFRLTPDHYLKSRKEMAALFADLPEALENTIEVARRCSFILKT
RGPILPRFTGASDDPEEAERAEVAELRRQAEEGLEERLAKLGMAPGYKEEDYRERLAFEL
GVIQRMKFPGYFLIVADFIKWAKQHDIPVGPGRGSGAGSLVAYALTITDVDPMRFSLLFE
RFLNPERVSMPDFDIDFCQDRREEVIRYVQQKYGREQVAQIITFGSLQARAALRDVGRVL
EMPYGQVDKICKLVPNNPANPTPLSKAIEEEPRLREEAEKEPVVARLLDIAQKIEGLYRH
ASTHAAGIVIGDRPLSQLVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLKT
AIDFVGKRGIHIDLASIPLDDPKTYETLSRGETVGVFQVESAGMRKALIGMRPDCIEDII
ALVALYRPGPMENIPVYNARKHGEEEIESIHPKIDYLLKETQGVIVYQEQVMQIAQVLSG
YSLGEADLLRRAMGKKIKAEMDKQRARFVDGAVKNGVSKPQADLIFDLLAKFANYGFNKS
HAAAYAIVSYQTAYMKAHYPVEFLAASMTLDMSNTDKINDFRQDAMRLGIQVVAPSVQTS
HRHFETGDNRIYYSLAALKGVGESAVDHIVAVRGDRPFASLEDFCLRIDPKLLNRRVFES
LIAAGAFDCFGYDRAELIGGLDRILGFAQRAQENKVSGQSDMFGAGAATGPEKIALPPYT
PWLASEKLHREFQVLGFYLSAHPLDTYNNLLAKMRVQTFADFSAAVKKGAAAGRLAGTVT
SKQERKTRTGNKMGIVAFSDASGQFEAVLFSEMLNQYRDLLEPGKSLVMTVDAEERPEGI
GLRIRTLRSLEEESLQMQKALRVYVRDCGPLRSIASHLNAKGDGLVSFIVIKDNGQREIE
VELNEKYRISPEIAAALRSAPGVVDVELV
NT seq 3510 nt   +upstreamnt  +downstreamnt
atgacaggcaaccagggtatcgggcagggtatcgggcacggcacaggggctgcggccgat
ccgcagttcgttcacctgcgggtgcattccgcctattcgttgctggaaggcgccttgccg
ctgaagaagatcatcggcaaggcggtcgccgacgatcagccggcgatcggcatcgccgac
accaataatctcttcgcggcactcgaattctcgcagaaggccgccgacgacggattgcag
ccgatcatcggctgccagctctcgatcgatatggaagacgaggcggaaggcgagcggcgc
ggacacgcccatcagttcgtcaaacttcccgcgatcgtgctgatcgcggcgaccgaggac
ggttacgcccgcctcgtcgagctcgtgagccgcgcctatctcgaaggtgagggtcaccag
caaacgcgaataagccgctcctggcttgcggctggcggcacgaccggcctgatcgcgctc
accggtgcgggagccggcccggtcgatatggcgctgaagtcgggttcgccggctctggcc
gaggcgcgcctaaaagccttgatcgagcttttcggcgatcgcctctatgtcgaactgcag
cggcacgggaattacgaccggcgtcacgagaaccgcatgatcgatctcgcctatcggctc
gacattccgctcgtcgccaccaacgaggcgtttttcccgtcgccgtccgactatgatgcc
cacgatgcgctgatggccgtcgctcacaatgcgatggtgtccgacgacagccgtttccgt
ctgaccccggatcattacctgaagagccgcaaggagatggcggcgctctttgcggatctg
cccgaggcattggagaatacgatcgaggtggcgcggcggtgctccttcatattgaagacc
cgcggaccgatcctgccgcgctttaccggcgcttcggatgatccggaggaggctgaacgc
gcggaggtagcggaactgcgccggcaggcggaggaggggctggaggaacgccttgccaag
ctcggcatggcgcccggctacaaggaagaggactatcgggagcggctggccttcgaactc
ggcgttatccagcggatgaagtttccgggctacttcctcatcgttgcggacttcatcaaa
tgggccaagcagcatgacattccggtcgggccgggccgcggctcgggtgccggctcgctg
gtcgcctatgccctgacgatcaccgatgtcgatccgatgcgcttctcgctgcttttcgag
cgcttcctcaaccccgaacgcgtgtcgatgcccgacttcgacatcgatttctgccaggac
cggcgcgaggaggtcatccgctacgtgcagcagaaatacggccgcgagcaggtggcgcag
atcatcaccttcggatcgctgcaggcgcgtgcagcactgcgcgacgtcggccgcgtgctg
gaaatgccctatggccaggtcgacaagatctgcaagctggtgccgaacaatcccgccaac
ccgacgccgctttccaaggcgatcgaggaggaaccgcgcctgcgggaagaggcggagaag
gagccggtcgttgcccgtctcctcgacattgcccagaagatcgaggggctttaccgccac
gcctcgacgcacgcggccggcatcgtcatcggcgacaggccgctctcgcagctcgtgccg
atgtaccgcgatccgcgctccgacatgccggtgacccagttcaacatgaaatgggtcgag
caggcgggtctcgtgaagttcgacttccttggcctgaagacgctgaccgttctgaagacc
gccatcgacttcgtcggcaagcgcggcatccatatcgacctcgcaagcattccgctcgac
gatccgaagacctacgagaccctttcgcgtggcgagacggtcggcgtgttccaggtggaa
agcgccggcatgcgcaaggcgctgatcggcatgcgcccggactgcatcgaggacatcatc
gcgctcgtggcgctctatcgcccgggtccgatggagaacatcccggtctacaacgcccgc
aagcacggcgaggaggagatcgaatcgatccatccgaagatcgattacctgctcaaggag
acgcagggcgtcatcgtctaccaggagcaggtgatgcagatcgctcaggtgctctcgggc
tattcgctcggcgaggctgacctcctgcgccgcgccatgggcaagaagatcaaggcggag
atggacaagcaacgcgcccgcttcgtcgatggcgccgtcaagaatggcgtctcgaagccg
caggccgacctgatcttcgaccttcttgccaagttcgccaattacggcttcaacaagtcg
catgccgccgcctacgccatcgtctcctaccagaccgcctacatgaaggcgcattatccg
gtcgagttcctcgcagcgtcgatgacgctcgacatgtcgaacacggacaagatcaacgat
ttccgtcaggacgcgatgcgcctcggcattcaggtggtcgcgccgtccgtgcagacctcc
caccgccacttcgaaaccggcgacaaccgcatctattactcgctcgccgccctaaagggc
gtcggcgagtctgccgtcgaccacatcgtcgccgtgcgtggcgatcgacccttcgcaagt
ctcgaagacttctgcctgaggatcgatccgaagctcttgaaccgacgggttttcgaaagt
ctgatcgccgccggtgctttcgactgcttcggctacgaccgggcggagctcatcggcggg
ctcgatcgcatcctcggtttcgcgcagcgcgcccaggaaaacaaggtgagcggccagagc
gacatgttcggcgcgggggccgcgacggggcccgagaagatagcgctcccgccctatacg
ccgtggctcgcctcggagaagctgcatcgcgagttccaggtcttgggcttctatctctcc
gcccatccgctcgacacctacaataatctgctcgcgaagatgcgcgtgcagacatttgcg
gatttctcggcagccgtgaaaaagggagcggcggcgggccgcctcgccggtacggtgacg
tcgaagcaggaacgcaagacgcgcaccggcaacaagatggggatcgtcgccttctcggac
gcttcgggccagttcgaggccgtgctcttctccgaaatgctgaaccagtatcgcgatctt
ctggagcccggcaaatcgctggtgatgacggtcgacgccgaagagcggccggaagggatc
ggccttcgtatccgaaccctgcgttcgctcgaggaggaatcgctgcagatgcagaaggcc
ttgcgcgtctatgtgcgcgactgcggaccgctgcgctccatcgcctcgcatctgaacgcc
aagggggacggcctggtttcctttatcgtcatcaaggacaacggacagcgggagatcgaa
gtcgagctcaacgagaaataccggatctcacccgagatcgccgccgcccttcgctccgct
cccggagtggtggacgtcgagctggtttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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