KEGG   Sinorhizobium meliloti Rm41: BN406_01462
Entry
BN406_01462       CDS       T02332                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
smi  Sinorhizobium meliloti Rm41
Pathway
smi03410  Base excision repair
smi03430  Mismatch repair
smi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:smi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BN406_01462 (recJ)
   03430 Mismatch repair
    BN406_01462 (recJ)
   03440 Homologous recombination
    BN406_01462 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smi03400]
    BN406_01462 (recJ)
DNA repair and recombination proteins [BR:smi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     BN406_01462 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BN406_01462 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BN406_01462 (recJ)
SSDB
Motif
Pfam: DHHA1 RecJ_OB DHH
Other DBs
NCBI-ProteinID: CCM67507
Position
complement(1505251..1507053)
AA seq 600 aa
MDVLADPIQRAFLGVERSVSGQRWVSRLDQAGQNRALAISQVHGYSELIARVLAGRGVGL
DDAAAFLEPTLRALMPDPDTLTDGRKAAERLADAIRRREKVVIFGDYDVDGAASSALMAR
FMRHFDITAEIYIPDRIFEGYGPNPQAIDQLIERGSELIVTVDCGSTSHEALAVAAERRT
DVVVIDHHQVGSVLPPCHALVNPNREDDLSGQGHLCAAGVVYLVLVNTLRVLRLRGDPRA
ASFDLLSLLDLVALATVCDVVPLKGLNRAYVVKGLLAARHMGNAGLAALLRKAAIGGPVT
PYHLGFLLGPRINAGGRIGDAALGSRLLTLDDAAAAEAIASQLDELNRDRQAMEAAMLAE
AEAEVLAEYGTGEGASVIVTARQNWHPGIVGLIAARIKEKFRRPAFAIAFDPNGRGTGSG
RSINGFDMGRLVRAAVDNGLLVKGGGHAMAAGLTVERGKLGQLRQFFEERAETAIRDLVA
VQTLKVDGALAAAGATLDLVDLLDQAGPYGSGHPQPLFAFPQHRLRDSRQVGANHVKVTL
EGQDGSRMEGIAFRAMETPLGDFLLGNRGATVHVAGSVSADLWQGTRKVQLRVTDAAKAN
NT seq 1803 nt   +upstreamnt  +downstreamnt
atggacgttttggcggatccgatccagcgggcatttctcggcgttgaacgctcggtcagc
ggtcagcgctgggtgtcgcgcctcgatcaggcgggccagaaccgtgcgctggccatcagt
caggtccacggctattccgaactcatcgcccgcgtgcttgccggacgcggcgtcggactg
gacgacgcggcggcattcctcgagcccacgttgcgcgcactgatgcccgatcccgacacc
ctgaccgacggccgcaaggcggccgagcggctcgcggatgctattcgtcgccgcgagaag
gttgtgatcttcggggactacgatgtcgatggtgcggcctcatccgcgctcatggcgcgt
ttcatgcggcatttcgatatcacggccgagatctatattcccgaccgcatcttcgagggc
tacggaccgaacccgcaggcgatcgatcaattgatcgagcggggctccgaactgatcgtc
acggtcgactgcggctcgacgagccatgaagcgctggcggtggcggctgagcgcaggacc
gatgtcgtggtcatcgaccaccatcaggtcggctcagtgctgccgccgtgtcacgccctg
gtgaatccgaaccgggaggacgatctgtcggggcaggggcatctctgcgccgcgggcgtc
gtctatctggtactcgtcaatacattgcgcgtgcttcgcctcaggggcgacccgcgcgcg
gcatccttcgaccttctgtcgctgctcgatctggtggcgcttgcgaccgtctgcgatgtg
gtgccgctcaagggcctcaaccgggcctatgtcgtcaagggactgcttgccgcacggcat
atgggcaatgcgggccttgccgcactcttgcgcaaggcggcgatcggcggacccgtgacc
ccctatcatctcggcttcctgcttggcccgcggatcaatgccggcgggcgtatcggcgac
gctgcgctcggcagccgtttgctgaccctcgacgatgccgcggcggcggaagccatcgcc
agccagctcgatgaactcaatcgcgatcgccaggcgatggaggcggcgatgcttgcggag
gcggaagccgaggtgctggcggaatacggaacgggcgagggcgcgtcggtgatcgtcaca
gccaggcagaactggcaccccggcatcgtcggtctcattgcggcgcgcataaaggagaaa
ttccgccggccggcctttgcaattgcgttcgatccgaacggccgtggaaccggatccggc
cgttcgatcaacggtttcgacatgggccggctcgtccgtgcggccgtcgacaacggcctg
ctggtcaaaggcggtgggcatgcaatggctgccgggctgacggtcgagcgcggtaagctc
ggccagcttcggcaattcttcgaagagcgcgcggaaactgccattcgcgatctcgtcgcc
gtccaaacgctcaaggtcgatggcgcgctggccgccgccggggcgacgctcgacctcgtc
gaccttctcgaccaggcgggaccttatggctccggccatccgcaaccgctctttgccttc
ccgcaacatcggctgcgggatagccgccaagtcggggccaaccacgtgaaggtgacgctc
gaggggcaggacggcagccgcatggaaggcatcgccttccgcgcgatggagacgccgctc
ggcgatttcctgctcggcaaccgcggcgcaaccgttcatgttgcgggttccgtgtcagcg
gatctgtggcaggggacacgcaaggttcaactgcgtgtgacggacgcggcgaaggctaac
tga

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