KEGG   Sinorhizobium meliloti Rm41: BN406_04784
Entry
BN406_04784       CDS       T02332                                 
Symbol
groL6
Name
(GenBank) 60 kDa chaperonin 6
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
smi  Sinorhizobium meliloti Rm41
Pathway
smi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BN406_04784 (groL6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smi03019]
    BN406_04784 (groL6)
   03110 Chaperones and folding catalysts [BR:smi03110]
    BN406_04784 (groL6)
   03029 Mitochondrial biogenesis [BR:smi03029]
    BN406_04784 (groL6)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smi04147]
    BN406_04784 (groL6)
Enzymes [BR:smi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     BN406_04784 (groL6)
Messenger RNA biogenesis [BR:smi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BN406_04784 (groL6)
Chaperones and folding catalysts [BR:smi03110]
 Heat shock proteins
  HSP60 / Chaperonin
   BN406_04784 (groL6)
Mitochondrial biogenesis [BR:smi03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    BN406_04784 (groL6)
Exosome [BR:smi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   BN406_04784 (groL6)
  Exosomal proteins of other body fluids (saliva and urine)
   BN406_04784 (groL6)
  Exosomal proteins of breast cancer cells
   BN406_04784 (groL6)
  Exosomal proteins of colorectal cancer cells
   BN406_04784 (groL6)
  Exosomal proteins of bladder cancer cells
   BN406_04784 (groL6)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: CCM71066
Position
pSYMA:complement(1275126..1276766)
AA seq 546 aa
MTAKEIRLSFRARDSMLHGIETLARAVAVTLGPRGRNVAINRSFGTKITKDGVTVAREIE
LEDKFEDMGVQLLRQVAIKTSYQAGDGTTTAVVLADAILRGGVRAVTAGMNPMDLKRGVD
RAVEAVVAELKQNARSVASNVEIAQVATISANGDGEIGQIIADAMAEVGKNGVIMIEEGR
SLETESEVITGIQFDRSYISPYFVTNRDKMRVEMEEALILVCETKLSSLSQILPLLEKVV
EADKPLLIIAEDFEAEVRAALVVNRLRGGLKVAAVKAPAYGELRKAILQDIALLTGGTVI
SEELGLKLESISLDRLGRARKIRVDKQNTTIAEGGGSSVEIAGRIAAIRAQLEATTSDFD
REKLQERLARLSAGIAVIRVGGATESAIREKKDRIRNAMHATRAAVEEGILPGGGVALLR
ASKAIRTLKAGNPDQQAGINIVKEAVMWPAKQIASNAGEEGSVVAARILQNDDYGWGYDA
QAGTFRDLLAAGIVDPAKVVRTALQGAASVAGLMIMTEAMLAEVPGPPPPELPGHHDHED
NLDIDF
NT seq 1641 nt   +upstreamnt  +downstreamnt
atgacggccaaggagatcaggctctctttccgggcgcgcgacagcatgctgcatgggatc
gagacgcttgcacgcgccgtcgctgtcacgcttggaccccggggtcggaacgtcgccatc
aaccgctccttcggcacaaaaataactaaggacggcgtgacggtagcaagagaaatcgaa
ctcgaggacaagttcgaggacatgggcgttcagttgctcaggcaggtcgccatcaaaacc
tcgtatcaggcgggcgacggaacgaccactgcggtggtcctcgccgacgcaattctcagg
ggcggtgtccgagcggtcactgctggcatgaacccgatggacctgaagcgcggggttgac
cgtgccgtcgaggcagtcgtcgcggagttgaaacaaaatgctagatctgtcgcttcaaat
gtcgagatcgcgcaggtcgccacgatttcggccaacggagatggggagatcggccagatc
atcgccgatgcgatggctgaggtcggcaaaaacggcgtgatcatgatcgaggaagggaga
tcgctcgaaactgaaagcgaagtcatcaccgggatccagttcgaccgcagctacatctct
ccctatttcgtcaccaaccgagacaaaatgcgggtggaaatggaagaggcacttattctc
gtttgcgagacgaagctgtcgagccttagccaaattttgccgcttctggaaaaggtcgta
gaggctgacaagccgcttctcatcatcgccgaggacttcgaggctgaagtcagggcggcg
cttgttgtcaacaggctccgtggcggcctcaaagtggctgctgtcaaggcgccggcctat
ggcgagctccgcaaggcgatcctgcaagacatagcgctgctcaccggcggaacggttatc
tcggaggagctaggtcttaagctcgagagcatatcgctcgaccgcctcggacgggcccgg
aagattagagtcgacaaacaaaataccacgatcgcggaaggaggcgggtcaagcgtggaa
atcgctgggcggatcgctgcgatcagggcgcagctcgaggcaactacgtccgactttgat
cgggaaaaacttcaggagcggctggcacggctctccgccgggattgctgtgatccgcgtc
ggcggcgcgaccgagtcggcgatcagggagaagaaggaccgcatccgcaacgccatgcac
gccacccgtgccgccgtagaggagggcatcctgccgggcggtggggtcgcgctgctgcgc
gcaagcaaggcgatccgaactttgaaggccgggaaccccgaccagcaggccggcatcaat
atcgtcaaggaagccgtaatgtggccggcgaagcagattgcgtccaatgcgggcgaggag
ggctcggttgtggccgctagaattctccaaaacgatgactacggctggggttacgacgcg
caggctggaacctttcgcgatcttttggcggcaggtattgtcgatcccgccaaagtcgtg
cgcacggcgctccaaggtgccgcctccgtggccggcctcatgatcatgacggaagcgatg
ttagccgaggtgcccggcccgccgccgcctgagcttcccggccatcatgaccatgaggat
aatctcgacattgatttctag

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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