KEGG   Breviolum minutum: v1.2.013334.t1
Entry
v1.2.013334.t1    CDS       T04349                                 
Symbol
symbB.v1.2.013334.t1
Name
(OIST) -
  KO
K10884  ATP-dependent DNA helicase 2 subunit 1
Organism
smin  Breviolum minutum
Pathway
smin03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:smin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    v1.2.013334.t1 (symbB.v1.2.013334.t1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smin03041]
    v1.2.013334.t1 (symbB.v1.2.013334.t1)
   03400 DNA repair and recombination proteins [BR:smin03400]
    v1.2.013334.t1 (symbB.v1.2.013334.t1)
Spliceosome [BR:smin03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    v1.2.013334.t1 (symbB.v1.2.013334.t1)
DNA repair and recombination proteins [BR:smin03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     v1.2.013334.t1 (symbB.v1.2.013334.t1)
SSDB
Motif
Pfam: Ku Ku_N Ku_C
AA seq 512 aa
MADFDPTDYDGHADDPLAVLEGQEIDELGGKGPQDIAQLKDAVLFVIDCSTPNSLKPLKA
GGRCLVAEALATAAGVLKTKVITAPDDKVGVLLYGVKEKQNPNNFDGIRLLHDLDRPSAQ
RIKVLEEEANRSPKQMEERYGCGRPIPVSDVFWTSTTIFNLGANQAQFDSRIFLFTCHDS
PAATADEVQAARTRVQDLMDMGVEIEFFPLQFEEKEFSIDRFWGALLPVDPMDYVSRATL
RLEQLERRIRMRIHRKRTLQRLSFHLCPGIEASVSVFVTMLEAKVPAPIYLLNENNKPLK
AECKQICEQTGALLHPVDDISTYVEVPGHRILVSRAEAMEAKHFGDPGLRLLGFKPSSLL
KDHHRIFHAYFVYPNEKGVRGSAVLLSALISSLLERKLMAICSYVARKNSEPMLVALLPQ
AEVEEEGEQLRPPGFVMIRLPWAEEIRQLSFPVPDGVPEEIPGELKAAAVAVVNALRLEN
FAPGCAENPKLQRHYAAIQAPGRLRKSIGLVI
NT seq 2933 nt   +upstreamnt  +downstreamnt
actttttgttagggaatttccatccatggcggattttgatcccacagactacgatggtca
cgcggatgatccactggctgtcctggagggtcaagagatagatgagttgggtggcaaggg
gccgcaggacatcgcccaactgaaggatgctgtgctctttgtgattgactgctcaacacc
caattctttgaagccattaaaggcaggtggccggtgtcttgttgcagaagcgctggccac
cgcggcgggtgttttgaagacgaaggtgatcactgcaccggatgacaaagtgggcgttct
cctttatggtgtgaaggaaaaacagaatcccaacaactttgatggcattcgcttgctgca
tgatttggaccgacccagcgctcaaaggatcaaagtcttggaggaagaagccaaccgaag
ccccaaacagatggaggaaagatatgggtgtggaaggccaatcccagtctccgatgtttt
ttggacttccacgaccatattcaatctgggtgccaaccaggcacagttcgatagtcgaat
cttcctcttcacatgccatgattctcctgcagcaacagctgatgaagttcaagcagcccg
gacacgggtccaggatttgatggacatgggcgtagagatcgaattctttccccttcaatt
cgaagagaaggaattctcgattgatcgcttttggggtgctttgcttccagtggatcctat
ggattatgtgagccgcgcaacgcttcgcttggagcagctggagcgacgcatccgcatgcg
cattcaccggaagcgtaccttgcaacgcctcagcttccacctttgcccaggaatcgaggc
gtctgtctcggtatttgtcaccatgctggaagccaaagttccagcacctatttatctcct
gaatgaaaacaacaagccattgaaagcggagtgcaaacaaatctgtgagcagactggtgc
tttgctgcatcctgtcgatgatatttcgacttatgtcgaggtaccaggtcaccgtatctt
ggtaagtcgtgctgaagccatggaggcgaaacatttcggtgatccgggtttgagactgct
gggcttcaagccatcgagccttttgaaggatcatcatcgcatcttccatgcgtacttcgt
ttatcccaacgagaagggtgttcgcggctctgcggtcttgctttcggcattgatcagtag
tttgcttgagcgcaagttgatggccatttgcagctatgtggcacgaaagaacagcgagcc
aatgttggtggctttattgccacaggctgaagtggaagaagaaggcgagcaactcagacc
tccgggttttgtgatgatccgccttccttgggcagaagagattcgtcagctgagctttcc
cgtgcctgatggtgtgcctgaagagataccgggtgaactgaaggcagccgcggtggccgt
ggtgaacgccctgcgcttggagaatttcgcccctggctgcgcggagaatcccaagttgca
aaggcactatgccgccatacaggcgccgggtaggttgagaaaaagcatcggtctggtcat
ttaaagtgccacttcggtgaaatcctggcattccatgtaaatcatggcccttcaaaaaag
cagtgctataaaagtttgattggactttaacaatttgcagccattttccacatgaacatg
ttccatgaccaatttttggtgcagccattttttggtgccaccacaaaaaatccaagtcgt
cagcggagaaacccattcgcggatccgaaagccatggtcttctcacaccagacttccaac
ttgaaggagaagctttctgcatgccgcactctggcctcacgccgtggtgttgccaattta
accttgaagaccgacatcattgggtcgccggccacggccttggcctcaaaaaacaccatc
tttgagtcctttgattccaacatccctgattcagagcgagaaggagttgttgtcagtcga
ccccggatggattctgaaagctcggaagaatcgcgtgaatgaatggtgaaaaacgacgga
ttcaaagggggttttctagggattgctagagatccttcaacaccaatccacatgtatcgt
gctgatgaccttcatgtacttccctggaagaaatgctgggttgattgatcaattgggatt
taaagtgttaagattgttatccagaacatgtggaaacggtaggtttttggaagccaaatg
ttcattctcaacgtggatggtgagagggcacccaagttgacggctccgatctgacgggaa
gtgacgagagatgtggggtatttgccctgaaaacatgtgatggtttctttagcttcaaat
aaatctgggtgttggggaaaacgtcacttcttcattctgcaaaatggaattcgcggtttg
tgcagccatagaataaaaagctggagtgcagaaatgtcaccagcacctcttcattctgca
tagtaagaagaagttgatttcacaaattccacttgatagactatccgggatggctaccag
tagacagcttcagatttgattggcgcgtttccctgcagcacatgtctaaacgctgaagga
ccaaaagccatgactgcatacctcaattgaaaacctgaatttgtcttgaaacttacaatt
cttgctgaaagcaaaggatgctcaagatctttttagaagcgtttttcttcgactgttggt
ggccaacccttccttttttgcattgttttggcttaatttggaattgtacagaatacagaa
tcttgcctgaaaaggcaactgctggactgtcaatgatttggatcaggattccttcccttt
tgcacagttaggacgggaagtcctgcgtcctgattggtcactttgagaatactcaaatac
aaatgcattggcaccacccgcttttgcaacgtaatcgggagactcacgaaaat

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