KEGG   Breviolum minutum: v1.2.016339.t1
Entry
v1.2.016339.t1    CDS       T04349                                 
Symbol
symbB.v1.2.016339.t1
Name
(OIST) -
  KO
K07562  60S ribosomal export protein NMD3
Organism
smin  Breviolum minutum
Pathway
smin03008  Ribosome biogenesis in eukaryotes
smin03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:smin00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    v1.2.016339.t1 (symbB.v1.2.016339.t1)
   03008 Ribosome biogenesis in eukaryotes
    v1.2.016339.t1 (symbB.v1.2.016339.t1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:smin03009]
    v1.2.016339.t1 (symbB.v1.2.016339.t1)
Ribosome biogenesis [BR:smin03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    v1.2.016339.t1 (symbB.v1.2.016339.t1)
SSDB
Motif
Pfam: NMD3_OB NMD3 NMD_SH3
AA seq 342 aa
MLMPRTGTKRFAVCPSCPGRRPKVTSLKETREGLDFYFETKSHAQRFADFVEAHVPTKSK
QSKHLISHDANSNSYAFKYTIMCELCPICVDDVVHVPKGHIATLNGAPPLLLCHKVTNAI
KFVDPISLRSYDIPTAEYWKRPVDSVCRTEHLTEYVVLNVEAVQKSEAAAKQNQPLKKWM
GLADVEVARACDLGVNDDRLIVRTHLGGILRPGRRVMGYDLRTVNVSGLDDEAFQGSCPD
VVLVKKAYKRKNKRSWELKRLTKEVAEGEDPIDDDADMEALKRNLEEDPELRKSVNMYRT
AEEQAGGVAEKAEAAEDDEDSDSDAPEVPLAELLEGLQLRDD
NT seq 1451 nt   +upstreamnt  +downstreamnt
tccttggccgaaggtacaacaagccgccatggacgaattgtgagccagagtccagagagc
tgctgggaatctgtttgaagaaaatccgaggccttggcaaagacgtcaggctggtggatg
ctgcttttgtttggactgaggaacatgctatgcgaatccgtgtgaagatcaccgttcaga
atgaggtggcccagtcttgcgttttgcagcagaccatggtcgtcgagtttcaaatagtca
atcagcaatgtgaggactgtcaaaagtctttcacaccacacgcctacaatgccattgtcc
aggtgaggcagaaggtgccacacagaaggactttttgctacttggagcagctgattctca
aatccgatgctcatgccaaggacgggaacgaagcgtttcgctgtttgtccatcctgtcct
ggtcgcagacccaaggtcacctccttgaaagagactcgggaaggtcttgatttttacttt
gagaccaaaagtcatgcgcagcgctttgcagactttgtggaagcacatgtgcctacaaaa
agcaagcagtccaagcacctcatatcccacgatgcaaatagcaactcctacgccttcaag
tacacgattatgtgcgagctatgtcctatttgtgtcgatgatgttgtgcatgtgcctaaa
gggcacattgccacactgaatggtgctcccccacttctactttgtcataaggtcacaaat
gcgatcaaattcgtggaccccatatcccttcggagttatgacattcctacagcggagtac
tggaagagacccgtcgattcagtttgcagaactgagcacctcactgagtatgtggtgttg
aatgttgaagcagtgcagaaatcagaggcagcggcaaagcagaatcagccacttaaaaag
tggatgggattggcggacgttgaggttgctcgcgcctgcgatctgggagtgaatgatgac
cgtctcatcgttcggacacatttgggcggaattctacgacctggtcgccgagtcatgggc
tacgacctgcgaacggtcaatgttagtgggctcgacgacgaagcctttcaggggagctgt
ccagatgtcgtactggtgaaaaaggcatacaagcgaaagaacaagagatcgtgggagctg
aagaggctaaccaaagaggtggcggaaggtgaagatcccatcgatgatgatgcagacatg
gaggccctgaagcgcaatctcgaagaagatccagagcttcgcaaaagtgtcaatatgtac
aggacagctgaggagcaagcgggaggcgttgcggagaaggctgaggctgccgaggatgat
gaggatagcgactccgatgcgccagaggtgccattggccgagcttcttgagggcctgcag
ttacgtgatgattgagccttgagagccgttgagttaatgagagcaagtgctaagggctct
tcgtttcagag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (706)   
   KEGG ORTHOLOGY (1)   
   RefGene (704)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (714)   

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