KEGG   Breviolum minutum: v1.2.019143.t1
Entry
v1.2.019143.t1    CDS       T04349                                 
Symbol
symbB.v1.2.019143.t1
Name
(OIST) -
  KO
K10746  exonuclease 1 [EC:3.1.-.-]
Organism
smin  Breviolum minutum
Pathway
smin03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:smin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    v1.2.019143.t1 (symbB.v1.2.019143.t1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smin03032]
    v1.2.019143.t1 (symbB.v1.2.019143.t1)
   03400 DNA repair and recombination proteins [BR:smin03400]
    v1.2.019143.t1 (symbB.v1.2.019143.t1)
DNA replication proteins [BR:smin03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    v1.2.019143.t1 (symbB.v1.2.019143.t1)
DNA repair and recombination proteins [BR:smin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     v1.2.019143.t1 (symbB.v1.2.019143.t1)
SSDB
Motif
Pfam: XPG_I DUF4187
AA seq 547 aa
MISRLQRALRELSIDFLVAPYEADAQLAYMCRIGWISTAISEDSDLLAYGCPSTLFKMDK
HGNGDHISLPFLQIDHAGQEVAIELPEADTKMGKGKKAGKSKKSGKSPKEVDQDEFGAET
EAKTKAKSAQLETADKEVQIHLNSWSPEKFSEFCVFCGTDYKDPDTHIKKFGIKTAFNMM
CKHSDAEALLSWMLTQKQFKERFPCDPSEYIPRFRQVVAVFWHHVVFDPKRGECISIASS
FPLTKTKRVLDGLDLQEVCGNFFDCQEALLMARGEMDPRSRQLKRLEPLTIAERRFINRL
LEDKRSELTEYRFQVSLQEEAQRRAEAEVNEPPKEVEEQIPQADNGEDGQEADVADVQVS
DKSIHLLPGDERKLLEIKNQFSKTESDDPTMEPHEKSKSTNPFSRKRVATPCHNGRAVPT
APVLVSKRAKVTLTTPHVEAAPQRQFKSLAPHSRGGYGAKEAAQAVLAQRGIADFEALEE
DRDKSKLKYFFPCKTEEKKPANKPSKLSAWNPRSWEDDTPEIKSVGHNSLSIRGGAWPGW
KLRSGWG
NT seq 2224 nt   +upstreamnt  +downstreamnt
tgctacttgcaacacaagtgagccaccaagtggccaaaccacacccaataaaatcagcgg
ggtcagcttgcaagccaccttgaaagtctgcttagcactcagcggcgccgatgctccaat
gggaattcaaggattgcttccgtttcttcgatcctatgtcaagaagacccacatcgaagc
attccaaggaaccaccattggagtcgatgcaatgtgttggatgcacaagggagcttacgc
atgttccagagagttggttgaaggcagagataccgacaaatttgtgaacttcttcctcag
aatgtgcactgtccttctacatcacaagataaagcctatcatcgtgtttgatggagaaag
gttgccagccaaggcaaaggaagagaagcgccgtggggaggtgcgagaagcagcaagatt
gcaggctttggaattgctacagcgaaaacaccatggtgaagacgtagatgagcgcgaagt
gaacaacaagtgcgaaactgcaatcaaagtgacgtcatccatgatctcccgactgcagag
ggctctcagagaactgtccattgactttctggtcgcgccgtatgaggcggatgcccaact
agcctacatgtgtcgaatcggttggataagtactgccatctcggaggacagcgatctttt
ggcatacgggtgcccatctacgttgttcaaaatggataaacatggcaacggtgatcacat
ctcgttgccatttttgcaaatagatcatgctggccaagaggttgccatagagctacctga
agcagacacaaaaatggggaaaggtaaaaaggcggggaagtcgaagaagtctggcaagtc
accaaaggaagtcgaccaagatgagtttggagccgagactgaggccaagaccaaagcgaa
gagtgcacaacttgaaactgccgacaaggaggtgcagatacacttgaatagttggtcacc
cgagaaattttcagaattttgcgttttttgtggaactgattacaaggatccggacacgca
catcaagaaattcggcatcaagacagccttcaatatgatgtgcaagcactccgatgcaga
agccttgctatcatggatgctgacacaaaagcagtttaaggaacgtttcccatgtgaccc
cagtgaatacattcctcgttttcgacaagttgtggcagttttttggcaccatgtagtgtt
tgatccaaaacgtggagaatgcatctccattgccagttccttcccattgaccaaaaccaa
gcgtgtcttggacggcctagacctgcaggaggtctgcggaaatttcttcgactgccaaga
ggcccttttgatggccagaggcgaaatggatccacggtctcgtcaactcaagaggttgga
accattgaccattgcagagcggagattcattaatagattgctggaagacaagcgatccga
gctcacggagtatcgatttcaagtctctttgcaggaggaagcgcagagaagggctgaagc
tgaagtgaatgaaccaccaaaggaagtggaagagcagatcccccaggctgacaacggtga
agatgggcaagaagctgatgtggcagatgtgcaagtcagtgacaagtcgatacacctcct
tccaggggatgaaaggaaactgttggagatcaagaaccagttcagcaagacagagtctga
tgatccaacaatggagccccatgagaaatctaaatccaccaatcccttttccaggaagag
agtagcgactccatgccacaatggtcgtgccgttcctacagctcctgttttagtatccaa
acgtgccaaggtcacattgaccacaccacacgtggaggccgcgccacagcgtcaattcaa
gtccctggcacctcattctcgaggtggctatggagccaaggaagctgcacaggcagttct
tgcacagcgagggattgctgactttgaagcccttgaagaagatcgcgacaagtccaagct
caaatatttctttccctgcaaaacagaggaaaagaagcctgcaaataagccgagcaagtt
gagcgcgtggaatccgagatcttgggaggatgacactccagaaataaagtctgtgggcca
caattcactttcgattcgaggtggtgcatggccggggtggaaattgcgttctggttgggg
ttgagcaatgccgcatgccattagctgcgttgcagggaatgggaaatacaatctttgatt
gtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (223)   
   KEGG ORTHOLOGY (1)   
   RefGene (221)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (230)   

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