KEGG   Breviolum minutum: v1.2.026933.t1Help
Entry
v1.2.026933.t1    CDS       T04349                                 

Gene name
symbB.v1.2.026933.t1
Definition
(OIST) -
  KO
K03283  heat shock 70kDa protein 1/2/6/8
Organism
smin  Breviolum minutum
Pathway
smin03040  Spliceosome
smin04141  Protein processing in endoplasmic reticulum
smin04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:smin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    v1.2.026933.t1 (symbB.v1.2.026933.t1)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    v1.2.026933.t1 (symbB.v1.2.026933.t1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    v1.2.026933.t1 (symbB.v1.2.026933.t1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:smin01009]
    v1.2.026933.t1 (symbB.v1.2.026933.t1)
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smin03041]
    v1.2.026933.t1 (symbB.v1.2.026933.t1)
   03009 Ribosome biogenesis [BR:smin03009]
    v1.2.026933.t1 (symbB.v1.2.026933.t1)
   03110 Chaperones and folding catalysts [BR:smin03110]
    v1.2.026933.t1 (symbB.v1.2.026933.t1)
   04131 Membrane trafficking [BR:smin04131]
    v1.2.026933.t1 (symbB.v1.2.026933.t1)
   03051 Proteasome [BR:smin03051]
    v1.2.026933.t1 (symbB.v1.2.026933.t1)
   03029 Mitochondrial biogenesis [BR:smin03029]
    v1.2.026933.t1 (symbB.v1.2.026933.t1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smin04147]
    v1.2.026933.t1 (symbB.v1.2.026933.t1)
Protein phosphatases and associated proteins [BR:smin01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-5
    PP5-interacting proteins
     v1.2.026933.t1 (symbB.v1.2.026933.t1)
Spliceosome [BR:smin03041]
 Complex B
  Other components
   Prp19 complex
    v1.2.026933.t1 (symbB.v1.2.026933.t1)
 Complex C
   Prp19-CDC5 complex
    v1.2.026933.t1 (symbB.v1.2.026933.t1)
Ribosome biogenesis [BR:smin03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    v1.2.026933.t1 (symbB.v1.2.026933.t1)
Chaperones and folding catalysts [BR:smin03110]
 Heat shock proteins
  HSP70 / DNAK
   v1.2.026933.t1 (symbB.v1.2.026933.t1)
Membrane trafficking [BR:smin04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    v1.2.026933.t1 (symbB.v1.2.026933.t1)
 Autophagy
  Chaperone mediated autophagy (CMA)
   Chaperones
    v1.2.026933.t1 (symbB.v1.2.026933.t1)
Proteasome [BR:smin03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    v1.2.026933.t1 (symbB.v1.2.026933.t1)
Mitochondrial biogenesis [BR:smin03029]
 Mitochondrial protein import machinery
  Endoplasmic reticulum membrane and cytosol
   Other ER-memrane and cytosol factors
    v1.2.026933.t1 (symbB.v1.2.026933.t1)
Exosome [BR:smin04147]
 Exosomal proteins
  Proteins found in most exosomes
   v1.2.026933.t1 (symbB.v1.2.026933.t1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: HSP70 MreB_Mbl StbA
Motif
AA seq 1216 aa AA seqDB search
MTAAGAVAASTRRKGRASKVAARAEVAPGEKVVGIDLGTTNSAVAAMEAGSPTVIPNAEG
ARTTPSVVAYSKSGELLVGQIAKRQAVVNPENTFYSVKRFVGRQPNEVEEELKEVSYKVD
FEGQKVKIDCPVMSKKFAPEEVSAQVLRKLSADAGKYLSAAVQKAVVTVPAYFNDSQRQA
TKDAGKIAGLDVLRIVNEPTAASLAYGLEKKNNETILVFDLGGGTFDVSVLEVGDGVCEV
LATNGDTHLGGDDFDKAKISLPFITADASGPKHIEESLSRAKFEQLASKLITRCRTPVES
AMKDAKLGASDIDEIVLVGGSTRIPAIQDLASELVGGKKPNQSVNPDEVVAVGAAVQAGV
LAGDVKDIVLLDVTPLSLGVETLGGVATVLIPRNTTIPTKKTEVFSTATDSQPSVEIVVL
QGERQFAKDNKILGTFRLDGVPPAPRGVPQIEVTFDIDANGILNVGAKDRGTGKEQXIMG
LAECKPCFSRSKMVSKKARAAAACAGLGGLAFVATPGPVARHVPAVEMAASKAAAAEASS
SAFTVGAAAMTAAGAVAASTRRKGRASKVAARAEVAPGEKVVGIDLGTTNSAVAAMEAGS
PTVIPNAEGARTTPSVVAYSKSGELLVGQIAKRQGVVNPENTFYSVKRFVGRQPNEVEEE
LKEVSYKVDFEGQKVKIDCPVMSKKFAPEEVSAQVLRKLSADAGKYLSATVQKAVVTVPA
YFNDSQRQATKDAGKIAGLDVLRIVNEPTAASLAYGLEKKNNETILVFDLGGGTFDVSVL
EVGDGVCEVLATNGDTHLGGDDFDKVIVDWLAEDFQKTEGIDLLKDRQALQRLTEAAEKA
KMELSGVQEAKISLPFITADASGPKHIEESLSRAKFEQLASKLITRCRTPVESAMKDAKL
GASDIDEIVLVGGSTRIPAIQDLASELVGGKKPNQSVNPDEVVAVGAAVQAGVLAGDVKD
IVLLDVTPLSLGVETLGGVATVLIPRNTTIPTKKTEVFSTATDSQPSVEIVVLQGERQFA
KDNKILGTFRLDGVPPAPRGVPQIEVTFDIDANGILNVGAKDRGTGKEQTITIAGSSTLD
KTDVEKMVQDAEVNAAEDEKRKEAVETKNNAESLVYQTEKQLQELGEKVPADLKASIDPK
LQALKDKVGEAEPDTDLLKTMTKDLQEELMKVGQAAYANTGSTPPPGDAGEAGAPPPGDA
KAEAKAKDDVIDVDGQ
NT seq 4200 nt NT seq  +upstreamnt  +downstreamnt
gtgaaagcgcgagcaagatttgactccattcccagaataggtttggttatccagcatgtg
gctaaggcagcagtgctttcactgtcggtgctgctgcaatgacagctgccggcgcagtgg
ctgcttctacccgaagaaagggccgtgcatccaaagttgctgcccgcgcagaagtggccc
ctggtgagaaggttgttggcatcgaccttggcaccacgaattccgctgtggctgctatgg
aggctggttctcctaccgtgatcccaaacgcagagggtgcacgcaccacacccagcgttg
tggcgtactccaagagtggcgagctcttggtgggccagattgccaagcgtcaggctgtgg
tgaatccagagaacaccttctactcagtgaagcgctttgttggtcgccagcccaacgaag
tggaggaagagctgaaagaggtgtcctacaaggttgacttcgagggccagaaagtgaaga
tcgactgccctgtgatgagcaagaagtttgcacctgaggaggtctctgcacaggttttgc
gcaagctgagtgcggatgccggaaagtacctgagtgccgccgttcaaaaggctgtcgtga
ctgtcccagcctacttcaacgactcgcagcgtcaggccacaaaggatgctggcaagattg
ctggcttggacgtgttgcgaatcgtgaacgagcctaccgctgcgtctttggcatatggtc
tggagaagaagaacaatgagaccatcttggtgtttgatttgggtggtggcacttttgatg
tctctgtcttggaggtcggtgacggcgtgtgcgaagtcttggccaccaacggcgacaccc
acttgggtggtgatgactttgacaaggccaagatctctttgcccttcatcaccgctgatg
cctctggtcccaagcacattgaagagagcttgtctcgtgcaaagttcgagcagcttgcga
gcaagctcatcacccgatgcaggacgccagtggagagcgcaatgaaggatgcaaagcttg
gtgcaagtgacattgatgaaatcgtgttggtgggtggctccacgcgcatcccagccattc
aggatttggcttcagagctggttggtggaaagaagcccaatcagagcgtgaatcccgatg
aggtggtggcagttggtgctgcagtccaggcaggtgtgttggccggagatgtgaaggaca
ttgtgctgctggatgtgacgccactttctttgggtgtggagacccttggtggcgtagcca
ccgtgctgatcccaaggaatactaccatcccaaccaagaagacggaggtcttctccactg
cgactgactctcagccatccgtggagattgttgtgctgcaaggtgagcgacaatttgcca
aggacaacaagatcttgggtactttccgcttggacggtgtgccccctgctcctcgtggtg
tgccgcagatcgaggtcacctttgacattgatgccaacggcattttgaacgttggggcca
aggatcgtggtaccggcaaggagcaancaattatggggcttgcagaatgcaaaccatgtt
tctccaggtcaaaaatggtgtctaagaaggctcgtgccgctgctgcttgcgctggtttgg
gagggctggccttcgtggcaacaccaggtccagttgctcgtcatgtcccagcggtggaga
tggcagccagcaaggccgctgcagcagaagccagcagcagtgctttcactgtcggtgctg
ctgcaatgacagctgccggcgcagtggctgcttctacccgaagaaagggccgtgcatcca
aagttgctgcccgcgcagaagtggcccctggtgagaaggttgttggcatcgaccttggca
ccacgaattccgctgtggctgctatggaggctggttctcctaccgtgatcccaaacgcag
agggtgcacgcaccacacccagcgttgtggcgtactccaagagtggcgagctcttggtgg
gccagattgccaagcgtcagggtgtggtgaatccggagaacaccttctactcagtgaagc
gctttgttggtcgccagcccaacgaagtggaggaagagctgaaagaggtgtcctacaagg
ttgacttcgagggccagaaagtgaagatcgactgccctgtgatgagcaagaagtttgctc
ctgaggaggtctccgcacaggttttgcgcaagctgagtgcggatgccggaaagtacctga
gtgccaccgttcaaaaggctgttgtgactgtcccagcctacttcaacgactcgcagcgtc
aggccacaaaggatgctggcaagattgctggcttggacgtgttgcgtatcgtgaacgagc
ctaccgctgcgtctttggcatatggtctggagaagaagaacaatgagaccatcttggtgt
ttgatttgggtggtggcacttttgatgtctctgtcttggaggtcggtgacggcgtgtgcg
aagtcttggccaccaacggcgacacccacttgggtggtgatgactttgacaaggtcattg
ttgactggttggcagaggatttccagaagactgagggcatcgacctgctgaaggacaggc
aagcgctgcagcgtctgacggaggcagcagagaaggccaagatggagctttctggtgtgc
aggaggccaagatctctttgcccttcatcaccgctgatgcctctggtcccaagcacattg
aagagagcttgtctcgtgcaaagttcgagcagcttgcgagcaagctcatcacccgatgca
ggacaccagtggagagcgcaatgaaggatgcaaagcttggtgcaagtgacattgatgaaa
tcgtgttggtgggtggctccacgcgcatcccagccattcaggatttggcttcagagctgg
ttggtggaaagaagcccaatcagagcgtgaatcccgatgaggtggtggcagttggtgctg
cagtccaggctggtgtgttggccggagatgtgaaggacattgtgctgctggatgtgacgc
cactttctttgggtgtggagacccttggtggtgtggccaccgtgctgatcccaaggaata
ctaccatcccaaccaagaagacggaggtcttctccactgcgactgactctcagccatccg
tggagattgttgtgctgcagggtgagcgacaatttgccaaggacaacaagatcttgggta
ctttccgtttggacggtgtgccccctgctcctcgtggtgtgccgcagatcgaggtcacct
ttgacattgatgccaacggcattttgaacgttggggccaaggatcgtggtaccggcaagg
agcagaccatcaccattgctggctcctccaccctggacaagacagatgttgagaagatgg
ttcaagatgctgaggtcaacgccgcagaggatgagaagcgcaaagaggcagttgagacca
agaacaatgcagagagccttgtttaccagaccgagaagcagctccaggaactgggagaaa
aggtaccagctgacctcaaggccagcattgaccccaagttgcaggccttgaaggacaagg
ttggtgaggctgagccagacactgacctgttgaagaccatgacaaaagacctgcaagagg
agttgatgaaggttggccaggcggcctatgccaacactggatccacccctcctccaggtg
atgctggtgaggcaggagctccacctccaggcgatgccaaggctgaagccaaggctaagg
acgatgtcatcgatgtggatggacagtaagattggcaaaccaacttttgactcgtcggag
gatgaacggtttcgccagttcggacggaagacaactctttgaatggaatcttcgaaagac
ctctagcttccttgcacagatctttgcaatttgcttccacttttctttaagcaagtgggt
aggatatgttagcacagcaagctttgtggggcatgcctccttaatcactcaaaatatcag
aaatgtgcagggttaaagcacgaggcagcaagtggctcaggacaggatgtcttgattggc
ttagtgtctaagatttgctaacacactatttccatatgtccagagccacaatgttgggta
cagaacatcgtgagcgcgaatgtgcaacaccgatagagtgcaatctttgcactttttcct
gtggaatatctgatttacaagtggcttcgcagccaaacatactactctcgcaatcggctt

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