KEGG   Breviolum minutum: v1.2.029284.t1
Entry
v1.2.029284.t1    CDS       T04349                                 
Symbol
symbB.v1.2.029284.t1
Name
(OIST) -
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
smin  Breviolum minutum
Pathway
smin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    v1.2.029284.t1 (symbB.v1.2.029284.t1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smin03019]
    v1.2.029284.t1 (symbB.v1.2.029284.t1)
   03041 Spliceosome [BR:smin03041]
    v1.2.029284.t1 (symbB.v1.2.029284.t1)
   03032 DNA replication proteins [BR:smin03032]
    v1.2.029284.t1 (symbB.v1.2.029284.t1)
Messenger RNA biogenesis [BR:smin03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     v1.2.029284.t1 (symbB.v1.2.029284.t1)
Spliceosome [BR:smin03041]
 Complex A
  U1 snRNP components
   Sm proteins
    v1.2.029284.t1 (symbB.v1.2.029284.t1)
  U2 snRNP components
    v1.2.029284.t1 (symbB.v1.2.029284.t1)
 Complex B
  U1 snRNP components
    v1.2.029284.t1 (symbB.v1.2.029284.t1)
  U4/U6.U5 tri-snRNP components
    v1.2.029284.t1 (symbB.v1.2.029284.t1)
 Complex C
  U2 snRNP components
    v1.2.029284.t1 (symbB.v1.2.029284.t1)
DNA replication proteins [BR:smin03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     v1.2.029284.t1 (symbB.v1.2.029284.t1)
SSDB
Motif
Pfam: LSM GDE_C SM-ATX Tail_tube
AA seq 120 aa
MAGLGIPVKLLHEGIGHTVTCELKTGEMYRGHLMNCEDNMNAMLEGVTVTGRDGKVTNLE
QVYLRGSQIRYFILPDMLRHAPMFKKKGRGAGRGVYGPGGKGRGKGLASRARTAAAATRK
NT seq 465 nt   +upstreamnt  +downstreamnt
ttcagaaacgaaaaaaacccaaacggcccgacgttgcccggctgtcagcatggcgggact
tggaattccggtgaagttgctacatgagggcatcggccacacggtgacctgcgagttgaa
gacgggtgagatgtacagaggccatttgatgaactgcgaggacaatatgaatgcaatgct
tgaaggagtcaccgtcaccggtcgagatggaaaggtgacgaacttggaacaagtctattt
gcgaggttcacaaatccggtacttcatcctgcctgatatgttacgacatgcgccaatgtt
caagaagaagggccgtggtgctgggcgtggtgtttatggtcctggtggcaagggtcgtgg
caagggcctggcatcacgtgcacgtaccgcggcagcggcaacacgtaagtgaggcaagcg
ggagaagcagttttggaatgtaagcgcggatgatgcgaaaggaga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (1869)   
   KEGG ORTHOLOGY (1)   
   RefGene (1867)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (1879)   

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