KEGG   Breviolum minutum: v1.2.034222.t1
Entry
v1.2.034222.t1    CDS       T04349                                 
Symbol
symbB.v1.2.034222.t1
Name
(OIST) -
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
smin  Breviolum minutum
Pathway
smin03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    v1.2.034222.t1 (symbB.v1.2.034222.t1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smin03019]
    v1.2.034222.t1 (symbB.v1.2.034222.t1)
   03110 Chaperones and folding catalysts [BR:smin03110]
    v1.2.034222.t1 (symbB.v1.2.034222.t1)
   03029 Mitochondrial biogenesis [BR:smin03029]
    v1.2.034222.t1 (symbB.v1.2.034222.t1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smin04147]
    v1.2.034222.t1 (symbB.v1.2.034222.t1)
Enzymes [BR:smin01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     v1.2.034222.t1 (symbB.v1.2.034222.t1)
Messenger RNA biogenesis [BR:smin03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     v1.2.034222.t1 (symbB.v1.2.034222.t1)
Chaperones and folding catalysts [BR:smin03110]
 Heat shock proteins
  HSP60 / Chaperonin
   v1.2.034222.t1 (symbB.v1.2.034222.t1)
Mitochondrial biogenesis [BR:smin03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    v1.2.034222.t1 (symbB.v1.2.034222.t1)
Exosome [BR:smin04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   v1.2.034222.t1 (symbB.v1.2.034222.t1)
  Exosomal proteins of other body fluids (saliva and urine)
   v1.2.034222.t1 (symbB.v1.2.034222.t1)
  Exosomal proteins of breast cancer cells
   v1.2.034222.t1 (symbB.v1.2.034222.t1)
  Exosomal proteins of colorectal cancer cells
   v1.2.034222.t1 (symbB.v1.2.034222.t1)
  Exosomal proteins of bladder cancer cells
   v1.2.034222.t1 (symbB.v1.2.034222.t1)
SSDB
Motif
Pfam: Cpn60_TCP1
AA seq 571 aa
KTMLSTLRQAAVRPLGARCFAAAKDIRHGSEARALMLEGCNRLADAVAVTMGPKGRNVVI
EQSFGAPKVTKDGVTVAKSIDLKSVPMVNVGAQLVKTVASKTNDVAGDGTTTATVLARAI
FREGCKAVAAGMNPMDIKRGMDHATKIVLEDLASQATHIETPDKIRSVATIAANGDEQIG
KMITEAFEQVGKDGTITVSDGKTMDHELEVVEGMSLDRGYISPYFITNVKAQKAEMENPL
VLIFDKKISSVQAILPVLEQVAKVQKPLLLIAEDVDGEALSMLIVNKLRGGLKVAAIKAP
GFGDNRKAILQDLSVLTGAELITEELGGKLEEVQLSQLGTAKTISIDKDSTVILDGAGEK
AKIEDRCESIRDSIDASTSEYEKDKMKERLAKLSGGVAVIKVGGASEVEVNETKDRLNDA
LCATKAALEEGIVPGGGTALLYATLKLEGVKLESLDQQVGVDAIKAALKQPCIQIAQNAG
EEGAVVVQTLTKEKALSKGFNAQTGEYVDLIEAGIIDPTKVVRTALADAVSVASLMTTTE
AIIAEEVEEKAGERGLSPYQQAGMRQDAMGF
NT seq 2149 nt   +upstreamnt  +downstreamnt
gaaaactatgctgtccaccctgagacaagctgcggtgcgaccgctgggcgcccgatgttt
tgctgctgccaaggacatccgtcatggcagcgaagcacgagctttgatgttggaaggttg
caaccgcctagctgatgcagtggctgtcaccatgggtccgaagggccgaaatgtggtcat
cgaacaatcctttggagcgccaaaggtgacgaaagatggtgtcacagtggcaaaatccat
tgacctgaagtcggttcctatggtcaatgtcggggcacagttggtgaagaccgtggccag
taagaccaacgatgtggcaggcgatggcactactactgccacagtgctggcacgtgcaat
cttcagagaaggctgcaaggccgtggctgctggcatgaacccgatggacattaagagagg
catggaccatgcaacaaagatcgtgctcgaggatttggcgagtcaagcaacacacattga
gactccagacaagatccgcagcgtggcgaccattgcagccaatggggatgagcagattgg
gaagatgatcaccgaagcctttgaacaggtcggcaaggatggcaccattacagtatctga
tggaaagactatggatcatgagttggaggtggttgagggaatgtcgttggatcgagggta
catttccccgtatttcatcaccaacgtgaaggctcagaaggcggagatggagaacccttt
ggtgctcatttttgacaagaagatctcctccgtacaggctattcttccagtgctcgagca
ggtggccaaggtccagaagcccttgctgctcattgcagaagatgtggatggagaggcact
ctccatgctcatcgtgaataagctgcggggtggcctcaaggtggcagctattaaagctcc
aggttttggcgataatcgtaaggccattttgcaggatctctccgtcttaacaggggccga
actcatcaccgaagagttgggtggtaaactggaggaagtgcagctttctcaattgggaac
tgccaagaccatcagcatcgacaaggatagcactgtgattttggatggtgctggagagaa
ggccaagattgaggacagatgtgagagcatccgcgacagcatcgacgcgtccacctcgga
atacgagaaggacaagatgaaggaacgtttggccaagttgagcggtggcgtggcagtcat
caaggtcggtggtgcctccgaggtggaggtcaatgaaaccaaggatcgcttgaacgacgc
cttgtgtgccactaaagccgctttggaagagggcatcgtccctggtggaggcacggccct
cctctatgcgactttgaagctggagggagtgaagttggaaagtttggatcaacaggtggg
tgttgacgccatcaaggcagccctgaagcaaccctgcatccagattgcccagaacgccgg
ggaagaaggtgctgtggtggtgcagaccctcaccaaggagaaggcgctttcgaaaggctt
caatgcacagactggtgagtatgtcgatctgattgaggcaggcatcattgaccccaccaa
agtggtccgaacagccctggcggatgctgtgtcagtcgcctccctcatgaccactacgga
ggccatcattgccgaagaggtcgaggaaaaggcaggcgaacgcggcctgtctccttacca
gcaggctggcatgcgacaagatgcaatgggattctgagcattccaaggagagatgcgaaa
aagaagccacaaagaatggaacgtttttggagaaagttaatgtccttacaccggtgtgtt
ccctgtggggaactggcggctatctggccaccggtaaggttaaggtagagagcgggtggc
gacgtgtgttgctcacacctcgcccgcggcgggcaacaactgttgcacaactgtcgaaaa
attccacgtacattggtgcgtgctttgcttttggtttggccgagcggaaatgcctggcca
agcgtttgcttttgatgcaatgattttttgttgttgaaagaagatttcaagattgttttg
gctatccttgacacgatcaattgttgtggatctgatatgtttagatggtttcaaaaacga
tgtttctccctgaaaatgaaatgcatcaaaagaaatggcagacaaaaac

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3260)   
   KEGG ORTHOLOGY (1)   
   RefGene (3258)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (3270)   

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