KEGG   Sphingobacterium mizutaii: 4412673_00569
Entry
4412673_00569     CDS       T05395                                 
Symbol
cca
Name
(GenBank) Multifunctional CCA protein
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
smiz  Sphingobacterium mizutaii
Pathway
smiz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smiz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    4412673_00569 (cca)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smiz03019]
    4412673_00569 (cca)
Enzymes [BR:smiz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     4412673_00569 (cca)
Messenger RNA biogenesis [BR:smiz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     4412673_00569 (cca)
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2 Helicase_dom4_arc
Other DBs
NCBI-ProteinID: SNV41924
Position
1:615774..617177
AA seq 467 aa
MSENLSHPIFSIIRELAHQEGVSCFVIGGYVRDRIMGRPFKDDIDILVLGSGIDFANKLG
EKLHTKVAVYKSFGTAMLVYEGLQVEFVGARKESYRKDSRKPIVEDGTLEDDQNRRDFTI
NAMAFSLNESNYGELIDPFQGLNDIQNRLIKTPLSPDITFSDDPLRMMRAIRFATQLNFR
IDSTALNAISENADRIQIISKERITDELNKIILAEKPSIGFKYLFDTGLLERIFPAMYQL
YGVEYVDGKGHKDNFYHTLEVLDNVAEMSNDLWLRWAAIMHDIAKPATKRFDKKVGWTFH
GHEDRGAKMVPKLFAELKLPLNEKMKFVQKLVMLHLRPIVLAKDIVTDSAVRRLLFEAAD
DIDDLMLLCHADVTTKNEYKKRKYRDNFELVKQKLKDVEERDHLRNWQPPVDGDDIMKTF
GIGPGKHVGIIKKAIREAILEGEIPNSRQEALSLMIEKGKTLGLTKV
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgagtgagaatttaagtcatcccattttttccataataagagaattagcccatcaggag
ggtgtttcctgttttgttatcggcggttatgtccgcgatagaatcatgggccgtccattt
aaggatgatattgacatccttgtcttgggaagcgggattgattttgccaataaattaggt
gaaaaactacatacgaaagttgctgtctataaatcttttggaacagcgatgttagtttat
gaaggcctacaggttgaatttgtgggtgctagaaaggaatcttaccgaaaagattccaga
aagccaatcgtagaggacggcaccctggaagatgaccaaaatcgtcgtgactttaccatc
aatgccatggctttttcgctaaatgagtcgaattatggcgaactcatcgatccattccaa
gggcttaacgatatccaaaataggctgataaaaacaccattgtctccggatatcaccttt
tcagatgatccattgagaatgatgcgcgccatccgttttgctacccaattaaacttcagg
atcgattcaaccgcgctgaatgccatcagtgaaaatgctgaccggattcagattatctct
aaagaacgtattactgacgaactcaataaaattatccttgctgaaaaaccttctatcggt
ttcaagtatttatttgataccggccttttagagaggatattcccagcaatgtaccaattg
tacggcgtggaatacgtagatggtaaggggcataaggataacttttaccatacactggag
gtattggacaatgtagctgagatgtctaatgatctttggcttcgttgggctgcaatcatg
catgatatagccaagccagctaccaagcgatttgataaaaaggtaggttggaccttccat
ggtcatgaggaccgtggtgcgaagatggtgcctaaattgtttgctgaactgaagcttcct
ttgaatgaaaagatgaagtttgtgcaaaaattggtgatgctccacctgagaccgatcgtt
ttggctaaggatatcgtgacggattcagcggtccgcagattattgtttgaagcggcagat
gatatcgatgatctgatgttgctatgccatgcagacgtcaccaccaaaaatgaatataaa
aagaggaaataccgggacaattttgaactcgtcaaacaaaaactgaaagatgttgaagag
cgagatcacctaagaaactggcaacctcctgtggatggtgatgatatcatgaaaaccttt
ggtatcgggcctggaaaacatgttgggattatcaagaaagcgattcgcgaggcgattttg
gaaggcgaaattccaaactctaggcaagaagcactatccttgatgatagaaaaagggaaa
accttggggctaaccaaagtttga

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