KEGG   Sinorhizobium meliloti AK83: Sinme_1625
Entry
Sinme_1625        CDS       T01521                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
smk  Sinorhizobium meliloti AK83
Pathway
smk03410  Base excision repair
smk03430  Mismatch repair
smk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:smk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Sinme_1625
   03430 Mismatch repair
    Sinme_1625
   03440 Homologous recombination
    Sinme_1625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smk03400]
    Sinme_1625
DNA repair and recombination proteins [BR:smk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Sinme_1625
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Sinme_1625
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Sinme_1625
SSDB
Motif
Pfam: DHHA1 RecJ_OB DHH Toprim
Other DBs
NCBI-ProteinID: AEG53362
Position
1:complement(1628734..1630536)
AA seq 600 aa
MDVLADPIQRAFLGVERSVSGQRWVSRLDQAGQNRALAISQVHGYSELIARVLAGRGVGL
DDAAAFLEPTLRALMPDPDTLTDGRKAAERLADAIRRREKVVIFGDYDVDGAASSALMAR
FLRHFDITAEIYIPDRIFEGYGPNPQAIDQLIDRGSELIVTVDCGSTSHEALAVAAERRT
DVVVIDHHQVGSVLPPCHALVNPNREDDLSGQGHLCAAGVVYLVLVNTLRVLRLRGDPRA
ASFDLLSLLDLVALATVCDVVPLKGLNRAYVVKGLLAARHMGNAGLAALLRKAAIGGPVT
PYHLGFLLGPRINAGGRIGDAALGSRLLTLDVAAAAEAIASQLDELNRDRQAMEAAMLAE
AEAEVLAEYGTGEGASVIVTARQNWHPGIVGLIAARIKEKFRRPAFAIAFDPNGRGTGSG
RSINGFDMGRLVRAAVDNGLLVKGGGHAMAAGLTVERGKLGQLRQFFEERAETAIRDLVA
VQTLKVDGALAAAGATLDLVDLLDQAGPYGSGHPQPLFAFPQHRLRDSRQVGANHVKVTL
EGQDGSRMEGIAFRAAETPLGDFLLGNRGATVHVAGSVSADLWQGTRKVQLRVTDAAKAN
NT seq 1803 nt   +upstreamnt  +downstreamnt
atggacgttttggcggatccgatccagcgggcatttctcggcgttgaacgctcggtcagc
ggtcagcgctgggtgtcgcgcctcgatcaggcgggccagaaccgtgcgctggccatcagt
caggtccacggctattccgaactcatcgcccgcgtgcttgccggacgcggcgtcggactg
gacgacgcggcggcattcctcgagcccacgttgcgcgcactgatgcccgatcccgacacc
ctgaccgacggccgcaaggcggccgagcgactcgcggatgctattcgtcgccgcgagaag
gtggtgatcttcggggactacgatgtcgatggtgcggcctcatccgcgctcatggcgcgt
ttcctgcggcatttcgatatcacggccgagatctatattcccgaccgcatcttcgagggc
tacggaccgaacccgcaggcgatcgatcaattgatcgatcggggctccgaactgatcgtc
acggtcgactgcggctcgacgagccatgaagcgctggcggtggcggctgagcgcaggacc
gatgtcgtggtcatcgaccaccatcaggtcggctcagtgctgccgccgtgtcacgccctg
gtgaatccgaaccgggaggacgatctgtcggggcaggggcatctctgcgccgcgggcgtc
gtctatctggtactcgtcaatacattgcgcgtgctccgcctcaggggcgacccgcgcgcg
gcatccttcgaccttctgtcgttgctcgatctggtggcgcttgcgaccgtctgcgacgtg
gtgccgctcaagggtctcaaccgggcctatgtcgtcaagggactgcttgccgcacggcac
atgggcaatgcgggccttgccgcactcttgcgcaaggcggcgatcggcggacccgtgacc
ccctatcatctcggcttcctgcttggcccgcggatcaatgccggcgggcgtatcggcgac
gctgcgctcggcagccgtctgctgaccctcgacgttgccgcggcggcggaagccatcgcc
agccagctcgatgaactcaatcgcgatcgccaggcgatggaggcggcgatgcttgcggag
gcggaagccgaggtgctggcggaatacggaacgggcgagggcgcgtcggtgatcgtcaca
gccaggcagaactggcaccccggcatcgtcggtctcattgcggcgcgcattaaggagaaa
ttccgccggccggcctttgcaattgcgttcgatccgaacggccgtggaaccggatccggc
cgttcgatcaacggtttcgacatggggcggctcgtccgtgcggccgtcgacaacggcctg
ctggtcaaaggcggtgggcacgcaatggctgccgggctgacggtcgagcgcggtaagctc
ggccagcttcggcaattcttcgaagagcgcgccgaaactgccattcgcgatctcgtcgcc
gtccaaacgctgaaggtcgatggcgcgctggccgccgccggggcgacgctcgacctcgtc
gatcttctcgaccaggcgggcccatatggctccggccatccgcaaccgctctttgccttc
ccgcagcatcggctgcgggatagccgccaagtcggggccaaccacgtgaaggtgacgctc
gaggggcaggacggcagccgcatggaaggcatcgccttccgcgcggcggagacgccgctc
ggcgatttcctgctcggcaaccgcggcgccaccgttcatgttgcgggttccgtgtcagcg
gatctgtggcaggggacacgcaaggttcaactgcgtgtgacggacgcggcgaaggctaac
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system