KEGG   Sinorhizobium meliloti AK83: Sinme_3024
Entry
Sinme_3024        CDS       T01521                                 
Name
(GenBank) ABC-type transporter, periplasmic subunit
  KO
K02035  peptide/nickel transport system substrate-binding protein
Organism
smk  Sinorhizobium meliloti AK83
Pathway
smk02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:smk00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Sinme_3024
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:smk02000]
    Sinme_3024
Transporters [BR:smk02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    Sinme_3024
SSDB
Motif
Pfam: SBP_bac_5
Other DBs
NCBI-ProteinID: AEG54731
Position
1:complement(3063607..3065235)
AA seq 542 aa
MLSINRRGALGLMGATAGSLVLPRFAFSQGKRPSVTIAVQKITINNTLDVWNEQSNVGER
VFFPNLWEGLILRDWMGNQGPVPGLATEWKRIDDKTLELKLRQGVKFHNGDELTADDVVF
SFSAQRVFGDTQPAGGKTVFEDEHKPATAKELPAVVPGTGRRLWPALAGVEAVDKHTVRF
HNATPDVTIEGRLYAFGSQIANRRAWDEAATYMDWARKPITTGPYMVGEHKPDVSLTLVA
FDDYWGGRPPLEQIRFVEVPEVSSRVNGLLSGEYDFACDLPPDQIAAVQAAPGYEVQGST
IHNHRISVFNVQNPTLQDPLVRRAMTHSIDRQAIVDALWSGQTTVPAGLQFPFYGDMFVE
GWTVPEYNPQLAKDLLKQANYKGDAIPFRLLNNYYTNQTANGQIMVEMWKQVGLNVEIQM
KENWGQIHDPSGAKGVRDWSAGAAFSDPVSSIVAQFGPNGEVQQKKDWANAEANQMAQIL
ETETDHAKRKKAFARMLEICEREDPVYQVLHQNAVFTGMKSSLNWKAAPAFAMDFRAANW
AS
NT seq 1629 nt   +upstreamnt  +downstreamnt
atgctttcaatcaatcggcgcggcgcgctgggcctcatgggcgcgactgcgggcagcttg
gtcctgccgcgcttcgcgttcagccaaggcaagcgcccatccgtcaccatcgccgtgcag
aagatcaccatcaacaatacgctcgacgtctggaacgagcagtcgaatgtcggtgagcgc
gtgttcttcccaaacctctgggagggtctgatcctgcgcgactggatgggcaatcagggt
ccggttcccggccttgcgacggaatggaagcgtatcgacgacaagaccctcgagctcaag
ctgcgccagggtgtgaagttccacaatggcgacgagctcacggccgacgacgtcgtgttc
agcttctccgcgcagcgcgtgttcggggacacccagcccgcaggcggcaagacggtcttc
gaggatgagcacaagccggccaccgccaaggaactgccggcagtcgtgccgggcaccggg
cgccgcctctggccggcgcttgccggcgtcgaggccgtcgacaaacataccgttcgcttc
cacaacgcgacgccggacgtcaccatcgagggccgcctttatgccttcggcagccagatt
gccaaccgtcgcgcctgggacgaggcggcgacctatatggactgggcacgcaagccgatc
accaccggcccctatatggtcggcgaacataaaccggacgtttccttgacgctcgtcgcc
ttcgacgactactggggcggccgcccgccgctggagcagattcgcttcgtcgaggttccg
gaggtttcgtcgcgcgtcaacggcctgctctccggcgaatacgacttcgcctgcgacctg
ccgccggaccagatcgccgcggttcaggccgcgcccggatatgaggtccagggctcgacg
atccacaaccaccgcatttccgtcttcaatgtacagaacccgacgcttcaggacccgctc
gtccgccgggcgatgacccattcgatcgaccgccaggcgatcgtcgatgcgctctggtcc
ggtcagacgaccgtgccggccggcctgcagttccccttctacggtgacatgttcgtcgaa
ggctggacggttccggaatataatccgcagctcgccaaggatctcctgaagcaggccaat
tacaagggcgatgcgatcccgttccgacttctcaacaattactacacgaaccagactgcg
aacggccagatcatggtcgagatgtggaagcaggtcggcctcaatgtcgaaatccagatg
aaggaaaactggggtcagatccacgacccgtccggcgcgaagggcgtgcgcgactggtcg
gccggcgccgccttcagcgatccggtctcctcgatcgtcgcccagttcgggcctaacggc
gaggttcagcagaagaaggactgggcaaatgccgaggccaaccagatggcccagatcctc
gaaacggaaaccgatcatgcgaaacgcaagaaggcattcgcccgcatgctcgagatctgt
gagcgcgaggacccggtctaccaggtgcttcaccagaacgcggtcttcaccggcatgaag
tcttcgttgaactggaaggcggcgcccgccttcgccatggacttccgcgccgccaactgg
gccagctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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