KEGG   Stenotrophomonas maltophilia K279a: Smlt0002
Entry
Smlt0002          CDS       T00718                                 
Symbol
dnaN
Name
(GenBank) putative DNA polymerase III beta subunit
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
sml  Stenotrophomonas maltophilia K279a
Pathway
sml03030  DNA replication
sml03430  Mismatch repair
sml03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sml00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Smlt0002 (dnaN)
   03430 Mismatch repair
    Smlt0002 (dnaN)
   03440 Homologous recombination
    Smlt0002 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sml03032]
    Smlt0002 (dnaN)
   03400 DNA repair and recombination proteins [BR:sml03400]
    Smlt0002 (dnaN)
Enzymes [BR:sml01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Smlt0002 (dnaN)
DNA replication proteins [BR:sml03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Smlt0002 (dnaN)
DNA repair and recombination proteins [BR:sml03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Smlt0002 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta_2 DNA_pol3_beta DNA_pol3_beta_3 DUF6212 Amino_oxidase
Other DBs
NCBI-ProteinID: CAQ43620
UniProt: B2FT80
Structure
Position
1608..2708
AA seq 366 aa
MRFTLQREAFLKPLAQVVNVVERRQTLPVLANFLVQVQNGQLSLTGTDLEVEMVSRIAVE
DAQDGETTIPARKLFEIIRALPDGSRITVSQTGDKITVQAGRSRFTLATLPSNDFPSVDE
VEATERVAIGEATLKELIERTAFAMAQQDVRYYLNGLLFDLRGDALRTVATDGHRLALCE
TDLAKPSGSKRQIIVPRKGVTELQRLLESGDREIELEVGRSHVRVKRDDVTFTSKLIDGR
FPDYEAVIPIGADREVKVDREALRASLQRAAILSNEKYRGIRVEVSPGNLKISAHNPEQE
EAQEEIEADTTVSDLAIGFNVNYLLDALSALRDEEVIIQLRDSNSSALVRESSSEKSRHV
VMPLRL
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgcgtttcacactgcagcgcgaagcctttctcaagccgttggcacaggtcgtcaacgtg
gtcgaacgccgccagacccttccggttctggccaatttcctggtccaggtgcagaacggc
cagctgtcgctgaccggtaccgacctggaagtggagatggtgtcgcggatcgcggttgaa
gatgcccaggacggcgaaaccaccattcccgcccgcaagctgttcgagatcatccgcgcc
ctgcccgacggcagccggattaccgtctcgcagaccggtgacaagatcaccgtgcaggcc
ggccgcagccgcttcaccctggccaccctgccctccaacgacttcccgtcggtggacgaa
gtggaagccaccgagcgcgtggccatcggcgaagcaaccctgaaggaactgatcgagcgc
actgcgttcgcgatggcccagcaggacgtgcgctactacctcaatggcctgctgttcgac
ctgcgcggcgatgcgctgcgcacggtcgccaccgacggccatcgcctggccctgtgtgaa
accgatctggccaagcccagcggttccaagcgccagatcatcgtgccgcgcaagggcgtg
accgaactgcagcgcctgctggagagcggcgatcgcgagatcgaactggaagtcggccgc
agccacgtgcgcgtcaagcgcgacgatgtcaccttcacctcgaagctgatcgacggtcgt
ttcccggattacgaagcggtgattccgatcggtgccgaccgcgaagtgaaggttgatcgt
gaagcactgcgtgcctcgctgcagcgcgccgcgatcctgtccaacgagaagtaccgcggc
atccgcgtggaagtctcgccgggcaacctgaagatcagcgcgcacaacccggaacaggaa
gaagcccaggaagagatcgaagccgacaccacggtcagtgatctggccattggcttcaac
gtgaactacctgctggatgccctctccgcgctgcgcgatgaggaggtcatcatccagctg
cgcgattccaactcttctgcgctggttcgtgaatccagcagtgagaagtcgcgtcacgtg
gtcatgccgctgcgtctctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (5)   
   Pfam (5)   
All databases (33)   

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