KEGG   Schistosoma mansoni: Smp_031360.1
Entry
Smp_031360.1      CDS       T01095                                 
Name
(RefSeq) putative cap binding protein
  KO
K12882  nuclear cap-binding protein subunit 1
Organism
smm  Schistosoma mansoni
Pathway
smm03013  Nucleocytoplasmic transport
smm03015  mRNA surveillance pathway
smm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Smp_031360.1
  09122 Translation
   03013 Nucleocytoplasmic transport
    Smp_031360.1
   03015 mRNA surveillance pathway
    Smp_031360.1
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smm03019]
    Smp_031360.1
   03041 Spliceosome [BR:smm03041]
    Smp_031360.1
Messenger RNA biogenesis [BR:smm03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     Smp_031360.1
Spliceosome [BR:smm03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    Smp_031360.1
SSDB
Motif
Pfam: MIF4G_like_2 MIF4G MIF4G_like
Other DBs
NCBI-GeneID: 8350412
NCBI-ProteinID: XP_018653934
Position
W:7684354..7707966
AA seq 925 aa
MRRKRRSDSFDEDDFRAKRDRTEPDTIESLIYRIGFKDLSNIERDIGELASVILTDIPKN
GEGLLKVLSNCVKNVPERILIYATLVGLLNLKNRSFVGQLIELLQRDLKDAIRSANFEDA
KYIVLFLSVSVNCHTVQKASILGLYENFAEVTLDAGRSSQARTDWYTYVILYGLPYSGYL
LASYDASALNDILGTIEVYMTKRQCPHVSLLRVWESNDPHPQEDLTPPDYDAEVIYPLPS
VIFRMFDYTDVIDQDENEIVPNSDLSSDGVKSSKETPVLPGAHTIERFLIDEHLAILMNN
LSFNRVMCAKALLGLKTRAKVALDYMIIEAVFAGMFHLPRPPVQHGNLLFYGSLLVQLCH
EASNTIPLVLAQATEVLFERLDNMKPVCIGSFSYYENVKRLLPKSFYIMLPPQPTVINKY
ESNPDLSSARAFFRLVDSIRARLEPQTVLRIAETASQSRGRRLSLSEPFDNDGVRDERDE
DASSDDSHSDHSDEERRGKSPIDTIPLSDPEFDELDDPEPAKQEMRSRLKARRRILRESA
MKRNLKISSEDNADEQVGVRSDSVEKLPFTTAPQVSELSPGVTNLAIELFYSAMLIAGHK
TISHTFAFIKKYAAVIRTLTSTVETQVEALHVIQAVWANNPQMIVIITEHMCRVGLIDPE
AVVRWAYSPIMTTLTDDTVNLNSANARPKILDFYVWECLSRTLVRVGRRVTRITNRLELA
KETMEINRRSSPYSTPDREDADQGGDGDSFSRTGVDSDSFFKKPKDSISGRVKVSDRRKL
MAGCELVSSSDDEAYGGGKDNVGGRVARLEEARCEAVRSQCAVITLLLHRHARLTAELAS
EMSGPSQNHSFNTDSPFFLHEPTQPKSLSDEALRNIMFWLKGRLVQVVLEHCDQLIPYLD
NLDEFICGAHPEVQGVFQQLRSLYA
NT seq 2778 nt   +upstreamnt  +downstreamnt
atgaggcggaagcggcgttctgattcgtttgatgaagatgactttagagcgaaaagagac
aggacagaaccagatactatcgaatctctcatatatcgaataggattcaaagacctttct
aatatagaaagggatattggagaacttgcgtcagttattctaacagatatcccaaagaat
ggagagggacttttaaaagttctgagcaattgtgtaaaaaatgttccagaacgaatacta
atttacgcaacgttagtcgggttactgaatctaaaaaatcgatcgtttgtcggccaattg
atagaactcctacaacgagacctgaaggatgccatcagatcggcgaattttgaggacgcc
aaatatatagttttgttcttgtcagtgtctgttaactgtcatactgttcagaaagcatct
attctcggtctgtacgagaattttgctgaagtcactcttgatgcaggacgaagttctcag
gctcgaactgattggtacacctacgtaatactttacggtctaccatacagtggttacttg
ctagcttcttatgacgcttcagcattaaacgacatattaggtacaattgaagtttacatg
actaaacgccagtgcccccatgtctcattattacgcgtttgggagtcaaatgatcctcac
ccacaagaagatctcacaccacccgattatgatgcagaggtcatttatcctcttccatct
gtgatttttcgaatgtttgattacactgatgtaattgatcaagatgaaaacgagattgtc
cctaattcagatttatcatcagacggagttaaatctagtaaagaaactcctgtcctcccg
ggagcacatactatcgaacgatttcttattgacgaacatttggcaattttgatgaataat
ttaagtttcaacagagttatgtgtgctaaagctctgctgggactcaaaactcgagcgaaa
gttgctttagattacatgatcattgaagctgtttttgctggaatgtttcacttacctcgt
ccaccagttcaacatgggaatcttctgttttatggaagtttactagtacagttatgccat
gaggctagtaatacaattcctctagtgttagctcaagccactgaagtcctatttgagcgt
ttagataatatgaaacctgtttgtattggcagtttttcatactacgagaatgtcaaacgt
ttacttccaaaatctttttatataatgttaccacctcaacctacggtaatcaataaatat
gaaagtaatccagatttgtcttctgcacgcgcattctttcgtctagtggattctattcga
gcgcgccttgaaccccaaaccgtcttaagaatagctgaaactgcctcacaaagtcgtggt
cgacgtctttcattatcagaaccatttgataatgatggggtaagagatgaaagagatgaa
gatgcatctagtgatgatagtcactctgatcatagtgatgaggagcgtcgtggaaaaagc
cccattgataccattcctctgtcagatcctgagtttgatgaactagatgatcctgagcct
gctaaacaagaaatgcgctctcgtcttaaagcacgtcgacgaattttacgggaaagtgca
atgaaacgtaatttgaaaatatcatcagaagataatgccgatgaacaggttggtgtaaga
agtgattctgtcgaaaagttgccatttaccacagcacctcaagtgtctgaactttctcct
ggagtgacaaatttagctattgaattattttattctgctatgttgatcgctggtcataaa
acaatcagtcacacatttgcattcataaaaaagtatgctgctgtcatccggactcttaca
tctaccgttgaaactcaagtagaagctttacatgtaattcaggcggtctgggctaataat
ccacaaatgattgtcattattacagaacacatgtgtcgtgttggtttgattgatccggaa
gcggttgttcgatgggcatattcacctataatgacaactttaacagatgatacagtcaat
ttgaactctgctaatgctcgtccaaaaattttagacttttacgtttgggagtgcttaagt
cgaactcttgttcgtgttggtaggcgcgttactcgaattacaaatagactagaactggca
aaagaaacgatggaaattaacaggcgttcttctccatattcgactcctgatcgtgaagac
gctgaccagggaggagatggtgatagtttctcacgaactggagtcgacagtgattcattc
tttaaaaaaccgaaagattccatttctgggagagttaaagtcagtgatcgacgaaagctt
atggcaggctgtgaactggtttcttcgtctgacgatgaggcttatggtggaggaaaggat
aatgtcggtggtcgagtagccagactagaagaagccagatgtgaagcagttcgtagtcaa
tgtgctgtcattacacttcttctgcatcgtcatgctagacttactgctgaacttgcatct
gaaatgtctggaccttctcaaaaccattcattcaatacggattctccatttttcttacat
gaaccaactcaaccgaaaagtttgtctgacgaagctttaagaaatataatgttttggtta
aaaggtcggttagtgcaggtggttcttgaacattgcgatcaattaataccttatctggat
aaccttgatgaatttatttgtggagctcatcctgaagttcaaggcgtgtttcagcagctt
cgttcattgtacgcatag

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