KEGG   Schistosoma mansoni: Smp_059130.1
Entry
Smp_059130.1      CDS       T01095                                 
Name
(RefSeq) putative cyln2 (cytoplasmic linker protein-115) (clip-115)
  KO
K10421  CAP-Gly domain-containing linker protein 1
Organism
smm  Schistosoma mansoni
Pathway
smm04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:smm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    Smp_059130.1
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:smm03036]
    Smp_059130.1
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:smm04812]
    Smp_059130.1
Chromosome and associated proteins [BR:smm03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Microtubule-associated proteins
     Smp_059130.1
Cytoskeleton proteins [BR:smm04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Cytoplasmic linker proteins (CLIPs)
     Smp_059130.1
SSDB
Motif
Pfam: CAP_GLY CLIP1_ZNF Pre-PUA
Other DBs
NCBI-GeneID: 8349369
NCBI-ProteinID: XP_018652045
Position
4:15385792..15433764
AA seq 1086 aa
MSHRDQETLNAEQTNFAVGDVVYVGPGTQRIGKIEFIGETQFASGLWIGVNLFSPCGKND
GCVDGVTYFTCSPLHGIFSKCGNVRLAPNPIPEESCSKVGPTIPDNDKAPDSQSKQNSVL
DVNSVCSSKVSLVNSPACAPGRNTLQIGDHVQVSGGRIGILRYLGPTEFAVGEWAGVELD
SPIGKNDGSVAGVRYFTCKPNYGLFAAANKVVPAGSKDEFCTSGFDASKNSQTRRSQESL
LSYSSNLSSVSRSYRLNQVNNGLQSRNSVAGNRRPISSMNTSNRRESTSNLQTLQRLIKE
KEAHIEQLLQEREMERSDLAKVTLEREMAQAETLNQRAVIQQLNQQLENMEAVLQHLRDE
HEQTTIKLHEERKNLEDLQFRIEEENIDKSTVESQNADDESKIFELEEALMSARETNERM
ELELNKLRIELNDLLQKQTKALDENNENKSQIQGKPSLQFTGLVSETSIIPTENEGESLQ
NECERLRHLLAERQTEAEIMLKHQAETIESLTVEFNGQVEKLNCQLQNSSNEIQTFKNEN
NLLKQQNNELVLGLKSQIDQLNEQLAEQEKIASEKLSMFENRIKELNDLLEAEKTKSTSS
SNESQMTSGDLKKLKDQQNATMEGLTDYQNDVLSAVESIHAVQIEEVNNLQSINKITNND
INTVSNEETIQLLLEKLKLQEELFNEQKDQLVNIQRQTITLNQDKENSDNKLNEIENYLD
KLKIQLNESRIKQEELLTELNSAHLKRDQLVEDISKVLGDLSITENEEDLSPILCKRIND
LKEQIAGHEKVRQDLEKYCQTLESERNDLESELTRVNVTLKNSNEIQMDNSTLKEELDNA
RQKMFSLEKSASNAFSQLEIKSNELQAIQSQLDKVLNEQMELEKVHNHTITVLESEKQVL
LERIKEAESRLLEHQPNSSTELTNQYGQSDINRLIEEKASTESQVNFLNSIIVDLHAKNA
ELESRVRAMLVGTDEQLNLLSNKHIKSRNPPLPTRLWCDNCLVFDSHDTKDCSQANGNNH
SHQHYTTNGVIKNSINHDEIPRKSSLKNFHKISKQNSSVTTNRLYCDNCGIFDDHVTENC
TDTQTF
NT seq 3261 nt   +upstreamnt  +downstreamnt
atgagtcaccgtgaccaagagactttaaatgcggaacaaacaaattttgcagttggtgat
gttgtatatgtcggtcctgggacccagcggataggtaaaattgaattcatcggagagacg
cagtttgccagcggattgtggattggtgtaaatttattctcaccatgtggaaagaatgat
ggctgtgtcgacggtgtgacttatttcacttgtagtccattgcatggaatattttccaag
tgtggtaatgtccgacttgccccaaaccctatacctgaggaatcctgctcaaaagttggt
ccaacaattcctgataatgataaagcgccagacagtcaatcaaaacaaaatagcgtttta
gatgtcaatagtgtctgttcatccaaggtgtcgctagtaaactctcctgcctgtgcacct
ggacgaaatactttgcaaattggtgatcatgttcaggtttctggaggtcgaatcggtatc
ctcagatatcttgggcctacagagtttgctgttggtgaatgggctggcgttgagttggat
agccctattgggaaaaacgatggctcagttgctggcgtacgatattttacttgtaaacca
aattatggcctgtttgcagctgctaataaagttgtacctgccggtagtaaggatgaattt
tgtacatctggttttgatgcatcaaaaaacagtcaaactcgccggagtcaagaatcatta
ctatcctattcatccaatttgagctcagtatctcggtcttatcgtctaaatcaagttaat
aatggattacagagtcgtaatagtgtagctggtaaccgaaggcctatatcatcaatgaac
acttcaaatcgtcgagaatctacatctaatttacaaacattacagcgtttaatcaaggaa
aaagaagcgcatattgagcaacttttacaggaacgtgaaatggaacgttctgatttagcc
aaagttactttagaaagagaaatggctcaagctgaaacattgaatcaacgagctgtgata
caacaattgaaccaacaattagaaaatatggaagctgttcttcaacatttacgcgatgaa
catgagcaaacaacgattaagctacatgaagaacgaaaaaatcttgaagatttacaattt
cgaatagaagaagaaaacattgacaagagcacagttgaatcacagaatgcagacgatgaa
tcgaaaatatttgaactggaagaagctttaatgtcagctcgtgaaacgaatgaacgtatg
gaattagaattaaataaattacgaatagaattaaatgatcttttacaaaaacaaacaaaa
gcgttagatgaaaataatgaaaacaaatcacaaatccagggaaaaccatctcttcaattc
actggacttgtatctgagacatctattattccaactgaaaacgaaggcgagtctttacaa
aatgaatgtgaacggttacgtcatttgttggctgagcgtcagactgaagcagaaattatg
ctaaagcatcaagctgaaacaattgagtcattaactgttgagtttaatggacaagttgaa
aaactaaattgtcagttgcagaattcttcaaatgaaattcagaccttcaaaaacgagaat
aacctactgaaacaacagaataatgaattagtcctaggtctaaagagtcaaattgatcag
ttaaatgaacaattggcagaacaggaaaaaattgctagtgaaaaattatccatgtttgaa
aatcggattaaggagttgaatgatttattagaagcagagaaaaccaaatcaacctcatct
tctaatgagtcccagatgaccagtggagatttaaagaaactaaaagaccaacaaaatgca
acgatggaagggttaactgattatcagaatgatgttttatcggctgtggaatccattcat
gctgtacaaatagaagaagtgaataatttgcaatcaattaacaaaatcactaataatgat
attaatactgtatcgaatgaagagactattcagttattattggaaaaacttaaattacaa
gaagaactattcaatgaacaaaaagatcaattggttaatattcaacgacaaactataaca
ctgaatcaagataaagagaattctgacaataaacttaatgaaattgaaaattatttagat
aagttaaaaatacagttgaatgaatctagaataaaacaagaagaattacttactgaatta
aacagtgcccatttgaaacgtgatcaattagttgaggatatttctaaagttctaggtgat
ttatctataactgaaaatgaagaggatttatcaccaattttatgtaaacgtattaatgat
ttaaaagaacaaatagctggacatgaaaaagttcgtcaagatttagaaaaatattgtcaa
acactagaaagtgaacgtaatgatcttgagagtgagctgacaagagtcaatgtgaccttg
aaaaattctaatgaaatacaaatggataattcaactttgaaagaagaacttgataatgca
cgacaaaagatgttttcattagagaaaagtgcttctaatgcatttagtcaacttgagatc
aaatcgaatgagttacaagctattcaatcacagttggataaagttttaaatgaacaaatg
gagcttgaaaaagtacacaaccataccataacagttttagaatctgagaaacaagtattg
ttggagcgtattaaagaggcagaaagtcgtttacttgaacatcaaccaaattcgtcaact
gagcttacaaatcagtatggacagtccgacattaatagattaattgaagaaaaggcttca
actgaatcacaagtgaattttctcaattccatcattgttgatctacatgctaaaaacgct
gaactagaatctcgtgtacgagcaatgcttgtcggaacggatgaacaattaaacttactt
tctaataaacatatcaaatcacgtaatccaccattacctacacgtctatggtgtgataat
tgtcttgtatttgacagtcatgatacaaaagactgttcgcaggcaaatggaaataatcac
tcacatcaacattataccactaatggtgtgattaaaaactcaataaaccatgatgaaatt
cctagaaagtcatctttaaaaaactttcataaaatttctaaacagaattcatctgtaaca
acaaatcgtttatactgtgacaattgtggtatatttgatgatcatgtaacggagaattgt
acagatacacaaacattttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (78)   
   KEGG ORTHOLOGY (1)   
   RefGene (74)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (88)   

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