KEGG   Schistosoma mansoni: Smp_167150
Entry
Smp_167150        CDS       T01095                                 
Name
(RefSeq) putative wd-repeat protein
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
smm  Schistosoma mansoni
Pathway
smm03040  Spliceosome
smm04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:smm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Smp_167150
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    Smp_167150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smm03041]
    Smp_167150
   04121 Ubiquitin system [BR:smm04121]
    Smp_167150
   03400 DNA repair and recombination proteins [BR:smm03400]
    Smp_167150
Enzymes [BR:smm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     Smp_167150
Spliceosome [BR:smm03041]
 Complex B
  Other components
   Prp19 complex
    Smp_167150
 Complex C
   Prp19-CDC5 complex
    Smp_167150
Ubiquitin system [BR:smm04121]
 Ubiquitin ligases (E3)
  U-box type E3
   Smp_167150
DNA repair and recombination proteins [BR:smm03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    Smp_167150
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 WD40_like eIF2A Ge1_WD40 Nup160 Cytochrom_D1
Other DBs
NCBI-GeneID: 8352147
NCBI-ProteinID: XP_018648795
Position
1:complement(39503397..39509087)
AA seq 389 aa
MNVQNINTTHQPPAGTAPTVPQSSDTSDNSSTVDSNQLQEETGISEDVINTLQERASQLT
AERKRRGKTVPEGLARSRAISEYQQLANHVGLHSASMPGINCLDISKTSPERIVTGGNDK
TAVVFDLSTSQVISILKGHNKKVTQVVYHPSEELVFTGSPDTTLRVWGVEQGQCASIIRA
HKGSVTGLSIHATGDYLLSCSSDGQWAFSDLRHGRVLVRISAVDKSGSIQALTCAQFHPD
GLILGTGTADGEVKIWDVKERRNVANFAHGSGTNQPVTAVAFSENGYYLATSGGDSQVKL
WDLRKLKNFKTLIPGEDQPSYEICDMEFDQSGSYLAVAGTDVRVYLCKQWDQLISFNAHT
APATGVRFGENATTVISASRDRSVKVFGT
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgaatgttcaaaatattaacacaactcatcaacctcctgctggcacagctccaactgtt
cctcaatcctcagacacaagtgacaactcaagtactgtagattcaaaccagctacaagaa
gagactggtataagcgaagacgttatcaacactttacaagaacgagctagtcagcttaca
gcagagcgaaaacgacgtggaaaaacagtacccgaaggattggctagatcgcgagctatt
tctgaataccagcagctggctaatcatgtaggccttcattccgctagcatgcctgggatt
aattgtcttgacatcagcaagacatctcctgagaggattgtaacagggggtaatgacaaa
actgctgttgtatttgatctttctacgtcacaagtcatatccattctcaaaggacataac
aaaaaggttacacaggttgtttatcatccatctgaagaattagtgttcacaggttcgcct
gacacaacgctaagagtatggggtgtcgaacaaggtcaatgtgcaagtataattcgtgcg
cacaagggatctgtaactggtttaagtattcatgcaactggagattatttgctttcgtgc
agctcagatggtcaatgggcattcagtgatttgcgacatggacgcgttttggttagaatt
tccgccgtcgataaatctggcagtattcaggcacttacttgcgcccagtttcatccggac
ggtcttattcttgggaccggtactgctgatggggaggtaaaaatctgggatgttaaggaa
cggcgcaatgtcgcaaatttcgcacatggttcaggtactaatcaaccagttacagctgtc
gctttttcggaaaacggatattatctggctacaagtggtggtgatagtcaagtgaagctc
tgggatctgcggaaattaaagaactttaaaactttgattcctggtgaagatcagccatct
tacgaaatatgcgatatggaattcgaccagtctggttcataccttgctgttgctggtact
gatgtacgtgtgtatttgtgtaaacagtgggatcagttaatttcgttcaatgcacatacg
gctccagcaactggagttcgctttggtgagaatgcaactacggttatttcagccagtcgt
gatcgttcagtaaaagtattcggtacataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (42)   

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