KEGG   Selaginella moellendorffii: SELMODRAFT_129893
Entry
SELMODRAFT_129893 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K14558  periodic tryptophan protein 2
Organism
smo  Selaginella moellendorffii
Pathway
smo03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SELMODRAFT_129893
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:smo03009]
    SELMODRAFT_129893
Ribosome biogenesis [BR:smo03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    SELMODRAFT_129893
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 Utp12 NBCH_WD40 WDR54 WD40_like Nup160 Utp13 BTRD1 Utp21
Other DBs
NCBI-GeneID: 9637129
NCBI-ProteinID: XP_002989520
JGI: 129893
UniProt: D8T1W3
Position
Unknown
AA seq 890 aa
MNAYRFSNLVGAPYRGGNVAFAGGSAALVSPVGNRISVTELRKSECWTLPVENGGDVSRV
AVSPNGALLLSIDASGRCILVSLARRILLHRMSFKAPVTALGFSPDGSLFAVAMGRLLQV
WRTPGCRKEFMAFQLLHTFSSSHDTITCLGWSPDGNWIICGCKDFAVRIFTLQSNAEGYR
PVVLSAHRNVVNGVFFTENTESGIGAYSFSKDGALCHWVFHPAQELPAPALDGADDQGKS
RKRRKEDDLEESDGLVRKEEGKLPVLRPDKGQWELMKKHLFHQHGRLSACDYHSGLNIVV
AGFSSGVFGIYQMPDFTCIHLLSISKEKITTAVFDRTGNWVAFGCAKLGQLLVWDWRSET
YILKQQGHYFDVNCVAYSPDSQLIATGADDNKVKLWNAASGFCFVTFAEHTNAVTAVLFL
AGSNAVLSASLDGTVRAWDLMRYRNFRTFTTPAPTQFVSLAADQSGEIICAGTLDTFQIY
VWSMKTARLVDVLSGHEGPVHGLAFSPTDEFLASSSWDKTVRLWDVFEGKGGVEAFTHTH
DVLTVVYRPDGKQLACSTLDGQIHFWDPIDGLLMGTIEGRRDVAGGRLMSDRRTAANSSS
GKCFTTMSYSADGSLLLAGGTSKYICMYDVADQVLLRRFQISHNYSLDGILDFLNSKRMT
AAGPIDLIDDYDSDNEAGVDGQVRGKLGQGLPGAQTNAARPIIRTKCLRISPTGRSWAAA
TTEGLLIYSMDNLVFDPTDLDVDVTPEAINDALESKRYSRALLLALRLNEPLLIQKCVEA
VDISAISDVVSNVSLSYLGTLIDALAQYLEKTPHLEFLLRWCLELCTVHGRTIQSKNREL
MPALKSLLKSIASLQEQLATAASKNDYLLHYLCSAPTKSKSVEQSLDLCS
NT seq 2673 nt   +upstreamnt  +downstreamnt
atgaacgcttacaggtttagcaatctcgtgggcgccccgtatcgcgggggcaatgtcgcc
tttgccggtgggagcgccgcgctggtgtcgccagtaggcaatcgcatctctgtcacggag
ctgcgcaaatccgagtgctggacgctgcctgtggagaatggcggcgatgtgtctagggtt
gccgtctcccccaatggcgcgctgttgctctccatcgacgccagcggccgctgcattctc
gtcagccttgcgcgccgcattctcctccaccgaatgtccttcaaggcgcccgtcacggcg
ctcggatttagccccgatggatcgctctttgccgtggccatgggcaggctgctccaggtg
tggaggacgcccgggtgccgcaaggagttcatggcgttccagctgctccacactttctcc
agcagccacgacacgatcacttgcctcggctggagccccgacggcaattggatcatctgc
ggctgcaaggacttcgcggtgaggatcttcacgctccagagcaatgcggagggctacagg
ccagtcgtgctctctgcgcaccgcaacgttgtcaatggcgtcttcttcactgagaacacc
gagagcgggattggcgcttatagtttctccaaggatggcgcgctgtgtcactgggtgttc
cacccggctcaagagcttccagctcccgcgctcgatggagctgacgatcaaggaaagtcg
aggaagcgccggaaggaggacgacttggaagaatccgatggccttgttcgaaaggaggag
ggaaagctacctgttctacgtcccgataaaggccagtgggagctcatgaagaagcacttg
ttccaccagcatggaaggctctcggcgtgcgactaccacagtggcctcaacatcgtggtt
gccgggttctcatctggagtgtttgggatctaccagatgcccgactttacgtgcatacat
ctgctatccatctccaaagagaagataaccaccgcagtgttcgacaggaccggaaactgg
gtagctttcggctgtgcaaaactgggccagctactggtgtgggactggcgctcggagact
tacatactcaagcagcaaggtcactacttcgacgtcaactgtgttgcatattcaccggat
tcgcagctgattgccaccggcgctgatgacaacaaagtaaagttgtggaatgctgcgtct
ggattctgtttcgtcacttttgccgagcacacaaatgcagtgaccgcagtgttgttcttg
gccggaagtaatgccgtgctgagcgcatctctcgatggcactgtacgtgcatgggatctg
atgcgctatcgaaacttccggaccttcaccacgccagcacccacgcagtttgtgtcattg
gctgcagaccaaagtggagagatcatatgtgctggaacgctggacacattccagatatac
gtttggtccatgaaaacagcgcggctagtggacgtcctcagtggtcacgagggaccggtt
catggtttggccttttctcctacagacgaattcttggcttcctcgtcatgggacaaaacc
gtgcgcttgtgggatgtgtttgaaggcaagggtggggttgaagccttcactcatacgcat
gacgtgctcaccgtggtttaccgtccggacggaaagcaactggcctgctcaacacttgat
ggtcagatccacttctgggacccgattgacggcttgcttatgggtacgatagaaggcagg
cgtgacgttgcaggagggagattgatgagcgacagaagaacggccgctaactcgagctcg
gggaaatgctttacgaccatgtcttactcagccgacgggagcctactgcttgctggagga
accagcaagtacatttgcatgtacgacgtcgcggaccaggttttgctacgaaggtttcag
atatctcacaactattcgttggatggtattctggactttctaaactcgaagagaatgact
gcagcaggtcctatagatctgatcgatgactatgacagcgacaacgaggccggtgttgat
ggtcaagttagagggaagttggggcagggactaccaggggcacagaccaatgctgcgagg
ccaattatacgcaccaagtgtctcaggatctctccaactggcaggtcttgggcagctgca
acaacggaaggcctgctcatctactcaatggacaaccttgtttttgatcccaccgatctc
gatgtggatgtcacaccggaggcaatcaacgatgcactggaaagcaagcgctattcacga
gcattgttgctagcactccggctgaacgagccacttttgattcaaaaatgtgtcgaggcc
gtagatatctctgcgattagtgatgttgtctcgaacgtctcactttcgtaccttggaaca
ctcattgatgcacttgcgcagtacctggagaagacacctcatttggagttcttacttaga
tggtgcctggaactttgcactgtgcatggcagaacaatccagtcgaagaacagggaactc
atgcctgctctcaagtccctgcttaaatccattgccagcttgcaggaacaacttgcaaca
gccgcttccaaaaacgactaccttctccattacctgtgctcggcccccactaagagcaag
agcgtggaacaaagcttggacttatgctcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (47)   

Download RDF
DBGET integrated database retrieval system