KEGG   Selaginella moellendorffii: SELMODRAFT_168153
Entry
SELMODRAFT_168153 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
smo  Selaginella moellendorffii
Pathway
smo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SELMODRAFT_168153
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_168153
   03110 Chaperones and folding catalysts [BR:smo03110]
    SELMODRAFT_168153
   03029 Mitochondrial biogenesis [BR:smo03029]
    SELMODRAFT_168153
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smo04147]
    SELMODRAFT_168153
Enzymes [BR:smo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     SELMODRAFT_168153
Messenger RNA biogenesis [BR:smo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     SELMODRAFT_168153
Chaperones and folding catalysts [BR:smo03110]
 Heat shock proteins
  HSP60 / Chaperonin
   SELMODRAFT_168153
Mitochondrial biogenesis [BR:smo03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    SELMODRAFT_168153
Exosome [BR:smo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SELMODRAFT_168153
  Exosomal proteins of other body fluids (saliva and urine)
   SELMODRAFT_168153
  Exosomal proteins of breast cancer cells
   SELMODRAFT_168153
  Exosomal proteins of colorectal cancer cells
   SELMODRAFT_168153
  Exosomal proteins of bladder cancer cells
   SELMODRAFT_168153
SSDB
Motif
Pfam: Cpn60_TCP1 GlutR_dimer Spike_torovirin
Other DBs
NCBI-GeneID: 9652751
NCBI-ProteinID: XP_002966190
JGI: 168153
UniProt: D8R5U7
Position
Unknown
AA seq 550 aa
MAKELVFNKDGQATKRLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIINDGVTVTKE
IELEDPVENIGVKLVRQAASKTNDLAGDGTTTSLILAQGLIAEGVKVVAAGSNPIQITRG
IDKTIAALVKELKEISKEVEDSELADVATVSAGNNDEVGKMIAEAMNKVGRKGVVTLEEG
KSAENTLHVVEGMQFERGYMSPYFVTDTDKMAVEYDNCKLLLVDRKIATARDVIGILEDA
IRGGYPLMIMAEEIEQEALATLVVNRLRGSLKIVAIKAPGFGERKTQYLEDIAILTGGTV
VREEVGLSLDKVGREVLGNAAKLVVTKDSTTIVGDGSTQEAVTKRVTQIRNLMEVAEQSY
EKEKLNERIAKLSGGVAVVTVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGTALL
RLSKKVDAIKETLENQEQKIGADIVKRALGYPIKLIAKNAGVNGSVVVEKVLANDNFNFG
YNAATGTYEDLMAAGIIDPTKVVRCCLEHAGSVAKTFLTSDVVVVDIKEEFIPTGAAQGM
AMDNSGYPPY
NT seq 1653 nt   +upstreamnt  +downstreamnt
atggccaaggagcttgtcttcaacaaggacggccaagccaccaaaagactccaggctgga
gtgaacaagctcgcggatcttgttggagtgactttgggtcccaaaggaaggaatgtcgtc
ctcgagagcaagtatggttctccaaagattatcaacgatggtgtcacggtgaccaaggaa
attgaattggaagacccggttgagaacattggtgtgaaactcgtgaggcaagctgcttct
aaaaccaacgatttggctggggatggaacgacgacttccttgatcctggcacaaggattg
attgccgaaggcgtcaaggttgtggctgctggctcgaatcctattcaaatcacgagggga
attgacaaaaccatcgcagctctggtgaaggagctgaaggagatttcgaaagaggtcgag
gatagcgagctcgcagatgttgctacggtgagcgccgggaacaatgacgaagtgggcaaa
atgatagccgaggccatgaacaaagtcgggaggaaaggcgttgtcactttggaagaaggc
aagagtgccgagaacacactgcacgtagtcgaaggcatgcagttcgagcgtggctatatg
tctccctacttcgtcacggacactgacaagatggccgtagagtacgacaattgcaagctc
ctcctggttgacaggaagattgctactgcgagagacgtgattggaatcctggaagatgca
attcgcgggggctatccccttatgattatggccgaggagatcgagcaagaagcacttgca
actctggttgtgaaccggcttcgtggctctctcaagattgtggccatcaaggccccagga
tttggagagaggaagacgcagtatctcgaggatattgccatcctcactggaggcacggtt
gtgcgggaagaagttgggctgtctttggataaagttggccgtgaagtccttgggaatgct
gcaaagctggtggtaacaaaggattcgacgacaattgtcggggatggaagcacacaggag
gccgtcacaaagcgcgttactcaaattcgcaacttgatggaggttgccgaacaaagctac
gaaaaggagaagctgaacgaacgtattgccaaattgtccggtggagttgcagttgtgact
gtgggagctcaaacggaaaccgagctgaaagagaagaagcttagagtggaggacgctcta
aatgcaacaaaggctgctgttgaggaaggcatcgttgttggtggaggcacagctcttttg
aggctgtcgaagaaagtggatgccatcaaggaaacgcttgaaaaccaggagcaaaagatt
ggcgcagacattgtcaagcgcgccttgggctacccgatcaaactcatcgccaagaatgca
ggagtgaacgggagtgtggtcgtcgaaaaggttttggccaatgataacttcaactttggc
tacaacgcagccacgggaacctacgaggatctcatggctgcaggaattatcgatcccaca
aaggtggtgaggtgctgccttgaacacgcgggatcagtggccaagacctttcttacgtcg
gacgttgtggtagtagacatcaaagaagagtttattcccactggagctgcgcaaggaatg
gccatggacaattcaggctatcctccttactaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (34)   

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