KEGG   Selaginella moellendorffii: SELMODRAFT_267436
Entry
SELMODRAFT_267436 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
smo  Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:smo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smo03016]
    SELMODRAFT_267436
Enzymes [BR:smo01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     SELMODRAFT_267436
Transfer RNA biogenesis [BR:smo03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    SELMODRAFT_267436
SSDB
Motif
Pfam: Dus zf-CCCH_4 zf-CCCH zf_CCCH_4 zf-CCCH_2 Herpes_U44
Other DBs
NCBI-GeneID: 9632709
NCBI-ProteinID: XP_002970397
JGI: 267436
UniProt: D8RHH3
Position
Unknown
AA seq 634 aa
MAAVEDRIEAEIVAENSANGAEGLIAKGVAPVQKEFLVSAQVRSTISDKDAAKISSEKKC
DVFVFLVSLIAIVLCLCSIQARKLEVCNAVVRAGDPNACPFGENCRFSHDLEGYLAQKPE
DLPGVCPSVSLNVPCPYGVRCRFYGTHTKQDLPKENPEGAMDGDEETSGAGEINVLRKDF
QKSLWKKLESFPKADSQLQAMGLKVTFLLSEQNKVYGPKKGATTEGENGGAETHDENNDV
SDDAVPPLKKPKLVDPVDDAKEQGDGCKLNSREKKKIDLKGKLYLAPLTTVGNLPFRRLC
KKLGADVTCGEMAMCTNLLQGHASEWALLRRHPVEDCFGVQICGSYADSLTKTVELIERE
CTVDFIDINLGCPIDIVVKKGAGSCLLTKPTRLEQIVRATASIMEKPLTLKMRTGYFEGK
NCAHSMISELSNWGVSAVTVHGRTRQQRYSKLADWVYIYDCAKRAPDDLQVLGNGDIFSY
SDWNEHMLPDLNLSSCMLARGALIKPWLLTEIKEQRHWDISSNERLDLLRDYTQFGLEHW
GSDSKGVETTRKFLLEWLSYLHRYIPVGLLEVIPQRLNWRPPRYVGRNDLETLMASDSAA
DWVRISEMLLGPAPEGFVFTPKHKSSAYDKAENG
NT seq 1905 nt   +upstreamnt  +downstreamnt
atggcggcagtggaggatcgtatcgaggcggagattgtcgcggagaattctgcgaatgga
gctgagggattgattgccaagggtgtggcgcctgtgcagaaggaatttctggtctcggca
caggtgcgttctaccatttcggacaaggacgccgccaagatttccagcgagaagaagtgc
gatgtcttcgtgttcctcgtatctctgatcgccattgtgttgtgtctgtgctctatccag
gctagaaagctcgaggtgtgcaatgccgtggttagagctggtgatccaaatgcctgtcca
tttggggagaactgtagatttagccacgacttggaaggctacttggcacagaaaccggaa
gatcttcctggagtttgcccgtcagtgagcttgaatgtgccttgtccttatggagtaagg
tgtcgattctacggaactcacacaaaacaagatctgccgaaggaaaaccccgagggtgcg
atggatggagacgaggaaacatcgggcgctggcgagatcaatgttctccgaaaggatttt
cagaagtcactctggaagaaacttgagagctttcctaaagctgatagccagctacaagcg
atgggtctcaaagtgacttttcttctttctgaacagaacaaggtttatggacctaagaag
ggtgctacaacggaaggagaaaatggtggagctgaaacgcatgacgaaaacaatgacgta
tcggatgacgcagttccgcctttgaagaagccaaagcttgtggatcctgtggatgatgct
aaagaacaaggagatggctgcaagctaaacagcagggagaagaagaaaatcgacttgaaa
ggcaagctttatcttgcccctctgacgacagtcgggaatcttccgtttcggaggctgtgt
aagaagctcggggccgacgttacctgtggagagatggcgatgtgtacaaaccttcttcag
ggccacgcatccgagtgggctcttttgaggcgccaccctgttgaagactgttttggcgtc
cagatttgtggctcttatgctgattctctgacgaagacggtcgagctgatcgaaagagaa
tgcactgttgacttcatcgacataaaccttggctgtcccatagatatcgtcgtcaagaaa
ggagctgggtcctgccttctcacaaagccgaccaggctggagcagatcgtgagagctact
gcgtcgatcatggaaaagcctttgacactcaagatgcgtacaggctatttcgagggaaaa
aattgtgctcactcgatgatctctgagttgagcaactggggagtctcggcagtcacggtt
cacgggagaactcgacagcagcgttacagcaagctcgcggactgggtgtatatctacgac
tgtgcaaagcgtgcccctgatgacttgcaagttctcggcaatggcgacattttctcgtat
agcgactggaacgagcacatgttacccgacctaaacctctcgtcgtgtatgcttgcgaga
ggagcgctcatcaagccgtggcttttgacggagatcaaggaacaaaggcactgggatatc
agttccaacgaaaggctcgatctgttgcgtgattatacgcaatttggattggaacactgg
ggctctgactccaaaggcgtggaaacgactcgaaagtttcttttggagtggctgagctac
ttacacagatacataccggtgggactcctggaagttatcccacaaaggctaaactggcga
cctccgcgctacgttggtcgaaacgatctcgagacgctcatggcatcggacagtgctgca
gactgggtccgcattagcgagatgctccttggtcccgctccagagggatttgtcttcact
cccaagcacaagtcgagtgcttacgacaaggccgagaatggttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (69)   
   KEGG ORTHOLOGY (1)   
   RefGene (63)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (83)   

Download RDF
DBGET integrated database retrieval system