KEGG   Selaginella moellendorffii: SELMODRAFT_44320
Entry
SELMODRAFT_44320  CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
smo  Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:smo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smo03016]
    SELMODRAFT_44320
Enzymes [BR:smo01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     SELMODRAFT_44320
Transfer RNA biogenesis [BR:smo03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    SELMODRAFT_44320
 Prokaryotic type
    SELMODRAFT_44320
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 9639872
NCBI-ProteinID: XP_002986271
JGI: 44320
UniProt: D8SSE2
Position
Unknown
AA seq 363 aa
RKIAIFVSYSGYGYQGMQRNKGCKTIEGDLEEALFKAGAIAESTFGDPRKIDWARAARTD
KGVSAAGQVVSGRFFVDPPGFVERVNSHLPKQIRVLGFTRVTGTFSAKNLCDRRRYEYVL
PVFALDPASHRVESPTIEAANPGDNLGEAITSEDVEEDTTSTTGTTTGRFTPTCTCTSSD
LETGFTFGDEERAKLTKILQNYVGTRYFHNFTCRVKPEDPSTQRYITSYEAGEVFTIQGC
KFVRCTVIGQSFMLHQIRKMIGLAVAVMRGDAPETIFERAFRRDTKIGVPMAPELGLFLD
ECLYTAYNQRFAGSHEEVSLKSFEKEIAEFKTEVIYPHIASTEAKDGVFARWLHGLTKER
YPD
NT seq 1089 nt   +upstreamnt  +downstreamnt
agaaagatcgccatcttcgtttcttacagtggttatggctaccaggggatgcagcgcaac
aaaggctgcaagaccatcgagggcgatctcgaggaagcgctgttcaaggcgggtgccatc
gcggagtcaactttcggggaccccaggaagatcgactgggcgagagctgcgaggacggac
aagggagtcagtgccgcaggccaagtggtgtccgggaggttcttcgtggatccgcctggc
tttgtggagcgtgtcaactcccatctcccaaagcagatccgggtgctgggattcacgagg
gtgacaggaacgtttagtgccaagaatctctgcgacaggcggaggtacgagtatgttctt
ccggttttcgccttggatccggcctcccaccgagtcgagagcccgaccatcgaagcagcc
aatccgggagacaatctgggagaagctatcaccagcgaggatgtagaggaagacaccact
tccaccaccggcactaccaccggcagattcactccgacttgcacctgcacaagcagtgat
ctcgagaccggattcactttcggtgacgaggagcgagccaagctcacgaagatcctccaa
aactacgttgggactcgctacttccacaactttacgtgccgtgtcaagccggaggatcca
agcacgcagcggtatatcacctcgtacgaggccggcgaagttttcacgatccaaggctgt
aagtttgtccggtgcacagtgatcggccagagcttcatgcttcaccagatccgcaagatg
atcggcctggccgtggcggtgatgcgaggtgatgctccggagaccatcttcgagagagcc
tttcggagggacacgaagatcggagttccaatggcaccggagctcggcctcttcctcgac
gagtgcttgtacactgcgtataaccagagattcgcgggaagccacgaagaggtctcgcta
aagtcgttcgagaaggaaattgccgagtttaagaccgaggtgatctatccccacattgct
tccaccgaagccaaggacggggtctttgctcggtggcttcacggcttgacgaaagagagg
tacccggat

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (30)   

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