KEGG   Selaginella moellendorffii: SELMODRAFT_444188
Entry
SELMODRAFT_444188 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
smo  Selaginella moellendorffii
Pathway
smo04120  Ubiquitin mediated proteolysis
smo04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    SELMODRAFT_444188
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    SELMODRAFT_444188
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smo04121]
    SELMODRAFT_444188
Enzymes [BR:smo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     SELMODRAFT_444188
Ubiquitin system [BR:smo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    SELMODRAFT_444188
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     SELMODRAFT_444188
SSDB
Motif
Pfam: WD40 YNR034W-A-like
Other DBs
NCBI-GeneID: 9634114
NCBI-ProteinID: XP_002979241
JGI: 444188
UniProt: D8S7Q0
Position
Unknown
AA seq 432 aa
MVVAPGRPMQLVVIVQLLMSNGQDAAAKRRCCVVRPPPRCPRRLEMEQGSSSRWAFRVRA
TIKPFASHATETIGSVAFDSSNELMATGGIARKIRVYDISAILDSEDKQQQDQAADEDDE
DGLEDEDEEGRFVSSRRRARNTFDTDRSSLSVICAPSRLSSLQWRPGKTGTIACGDYDGV
VTEWSVERQIPLVERDEHGGRHVWSVDYATDMSGVCVSASDDGTARVWQGGMERSALTIR
APDSKPFCCAEFDPLSSTLLALACADGKVYVHDLRRPECPVWTLAHHRRAASYARFLDRE
RLVTASVDSTICVWDLAAPPAPRVVESFSQHQNVRNFVGLSVWRKGEMVACGSETNQAYV
YQVGSGGGGDQSFVLRHQFSSSSWSSSTDSSSARRNSSLASAVCWMEDCSCTLAAANSEG
VLQILSGEFGGV
NT seq 1299 nt   +upstreamnt  +downstreamnt
atggtagtagcacctggaaggccgatgcaactggtggtgatcgtccagttgctaatgtcc
aatggacaagacgcggctgcaaagcgtcgatgctgcgttgtgaggcctcctccccggtgt
ccccggaggctggagatggaacaagggagctcctcgcggtgggctttccgggtgcgtgct
acgatcaagccttttgcgtctcatgcgaccgagaccatcggctcggttgctttcgacagc
tccaacgagttgatggcaacggggggtattgctaggaagatcagagtctacgacatctcg
gcgatcctggactccgaggacaaacagcagcaggatcaggctgctgatgaagacgatgaa
gatggtctcgaagacgaagacgaagagggccgcttcgtgagctctcgccggcgtgctcgc
aacactttcgacacggacaggagctctctgtctgtcatctgcgcgccgtcgaggctgagc
agcttgcagtggcggccgggaaagacagggacgatcgcatgcggggactacgacggggta
gtgacagaatggagtgtggaaagacaaatcccgcttgtggaaagagacgagcacggcggc
cggcacgtctggagcgtcgactacgcgacagacatgtcgggcgtgtgtgtgtcggcctcg
gacgacgggacggctcgggtgtggcaaggcggcatggaaaggtcagctctcacaattcgg
gcacccgactcaaagccgttttgctgtgcagagtttgatcctctctcgagcacgctgctc
gcgctcgcctgcgccgacggcaaagtttacgtgcacgacttgcgaaggcccgagtgcccg
gtgtggacgctggctcaccaccgccgggccgcgagctatgcacggtttctagacagggaa
aggctggtgaccgcgtccgtggatagcactatttgcgtgtgggacttggcggctcctccg
gctccgcgggtggtggagagctttagtcagcaccaaaacgtgaggaactttgtggggctc
tcggtgtggaggaagggagagatggtggcgtgtggatccgagacgaaccaggcatacgtc
tatcaggtcgggagcggtggtggcggtgatcaaagctttgttttgaggcaccagttctcg
tccagttcttggagttcttccacggattcctcctccgcgcggaggaactcgagcttggcg
agcgcggtttgctggatggaagattgctcgtgtactctcgcggctgcgaactcggaggga
gtgctgcaaatcttgtctggggagtttggcggtgtttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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