KEGG   Selaginella moellendorffii: SELMODRAFT_446044
Entry
SELMODRAFT_446044 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K14325  RNA-binding protein with serine-rich domain 1
Organism
smo  Selaginella moellendorffii
Pathway
smo03013  Nucleocytoplasmic transport
smo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    SELMODRAFT_446044
   03015 mRNA surveillance pathway
    SELMODRAFT_446044
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_446044
Messenger RNA biogenesis [BR:smo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     SELMODRAFT_446044
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_occluded RRM_8
Other DBs
NCBI-GeneID: 9645112
NCBI-ProteinID: XP_002984875
JGI: 446044
UniProt: D8SN86
Position
Unknown
AA seq 354 aa
MATKVVKPKSSSPARSGSSSYSGSSRSRSRSASSSGTSASSGRSRSPRKRLAKPAEDSSR
LHVSQLSRNVNESHLKEIFGNYGDIIAVDLAMDKTVNLPKGFAYVDYKSKSDAEKAQQFM
DGAQVDGLVISVKLTRKVSPARGVSPKRDAAPPRRRPPASSPVRRRSPSPGFRRRRRSPN
RSPIRRPMGRQRSPAPYRRRSPLPVRRGRTPPRRSSPVRRRSRTPPPRRMRSPPRRMMRS
RSRSRSAPRRARSPPNRRGRSSSYSSGSPSPVRRSYQQQSQPKSCFSKEHQPRLWLQRIK
VSTFSHLCLQKHSFVDTFVFGIGPSKLFLCFLADDKELERLTPLRQTSSTQRQA
NT seq 1065 nt   +upstreamnt  +downstreamnt
atggcgaccaaggttgtcaagccgaaatcgtcctcgccggcgcgctcgggatctagctcc
tactcgggctcctcccgctcgcgatccaggtctgcgtcgtcgtccgggacgagcgccagt
tccgggcggagccggagccctagaaagcgcttggccaagccggccgaggattccagccgc
ttgcacgtcagccagctctcgaggaatgtgaacgagtcccatctcaaggagattttcggg
aactatggggatattattgctgtggatcttgcgatggacaagacggtgaatcttccaaag
ggatttgcgtacgtggattacaagagcaaatcggatgctgaaaaagctcaacagttcatg
gatggggctcaagtcgatggactcgtcatcagtgtaaagctcacaagaaaggtatccccg
gcacgaggggtgtctccaaaacgagacgctgcgccaccgcgacgaaggccaccagcttcg
tcgccggtaaggcgacggtcaccttcaccaggattccgaaggcgacggaggtctccaaac
aggagcccaatacgaaggcctatgggtcgtcagcgatcgccagctccttacaggcgcagg
tcaccacttccagtcaggcgaggacgtacaccaccacggaggtcttccccagttcgacgt
cgttcaaggacccctccaccgaggcgtatgcgctcgcctccaaggcggatgatgcgatca
cgttccagatcgcgttcggctcctagaagagcaagatcaccaccaaacaggcggggcagg
tcaagctcctactcatccggatctcctagtccagtgagaagaagctaccagcagcagtcc
cagccgaagtcctgtttctccaaagaacaccaaccacgcctgtggctacaaaggataaag
gtttccacattttcacacctctgcctccagaaacacagctttgtggacacctttgttttt
ggcattggtcccagtaaattgttcttgtgcttcctggcagatgataaggagcttgagaga
ttgacacccctgaggcaaacatcatccacccagaggcaagcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (143)   
   KEGG ORTHOLOGY (1)   
   RefGene (137)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (157)   

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