KEGG   Selaginella moellendorffii: SELMODRAFT_63437
Entry
SELMODRAFT_63437  CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
smo  Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:smo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smo03016]
    SELMODRAFT_63437
Enzymes [BR:smo01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     SELMODRAFT_63437
Transfer RNA biogenesis [BR:smo03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    SELMODRAFT_63437
 Prokaryotic type
    SELMODRAFT_63437
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 9633072
NCBI-ProteinID: XP_002960699
JGI: 63437
UniProt: D8QP88
Position
Unknown
AA seq 403 aa
RKKKVAMWIGYVGTGYKGNHCSLFLELSALNSSLTAIEADLDKAIYKAGGILDSNYGHHM
KVGWARSSRTDKGVHSLATVISLKMELPIDAWRDDPGGIEIADMINRHLPQCIRVFGVVP
VSKTFRPRMACSERSYDYFLPALCVGINQRVSTCEIKQLLEQFRLQLKLFEGEHPFHNYT
IRRNYGKPKQQDLNWRTRTPIAADNSSSSSEEEDEDGDADEPRLRVQQKPSPAYWLQELD
PTDRITAQHYRKIIRCSCGDIEKFGDTLALRVSVTGASFMVHQIRKMIGTAVAVTRKLLP
PDIIQMSLCRHSRIVLPIAPCEGLTLASSKFCSQHSTSHAINLSSLGCQRREAFWKDHVF
LEIVKAMRSERDPWNKWCEAMDSYCYLPEPNVSSLRDAWLDWK
NT seq 1209 nt   +upstreamnt  +downstreamnt
aggaagaagaaggtcgcaatgtggattggatacgttggaacaggctacaaaggcaatcac
tgttccttgttcttggagcttagtgctctcaatagttccttgacagccatagaggccgat
ctagacaaagctatttacaaggctggagggattctcgacagcaactacggccaccatatg
aaggtcggttgggcgagaagcagtagaactgacaagggggtgcattcactagctacagtg
atatccctgaaaatggagctgcctatagatgcttggagagacgaccctggtggaatcgag
atcgcagacatgataaatcgccatcttccacaatgtatacgcgtttttggagtcgtccca
gtaagcaaaacttttcgtcccaggatggcatgctctgaaaggtcttacgactacttcctt
ccggcgctgtgcgtgggaatcaatcaaagggtatccacttgtgagattaaacaactcctg
gaacagttcaggctccagctaaagctgtttgagggcgagcacccgtttcacaactacact
atacggcgcaactatggaaaaccaaaacaacaagatctcaactggcgtacgagaactccc
atagcggcggataattcttcttcttcttctgaagaagaagacgaggatggagatgccgac
gagccacggcttcgggtccaacagaagcctagtcctgcatactggctgcaggaactggat
ccgacagacaggatcacggcacaacattacagaaagatcatcaggtgctcttgtggtgat
atagaaaagttcggagacacgcttgctctcagagtcagtgttacgggcgcttctttcatg
gttcaccagatacgaaaaatgatcggaacggctgttgctgtgacccgaaagttgctacct
ccggacataatccaaatgtctctctgcaggcattcacggattgtcctgccaatagcacct
tgtgaaggcctgacactcgcctccagtaagttttgttcccaacacagtacatctcatgcc
atcaacttgagtagcctcggatgccaaagaagggaggccttttggaaagaccacgttttc
ctggagattgtcaaggccatgaggagtgagagggatccttggaacaagtggtgcgaagca
atggactcgtattgttatctccccgagccaaatgtaagctctcttcgtgatgcgtggtta
gactggaag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (1)   
   Pfam (1)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system