KEGG   Selaginella moellendorffii: SELMODRAFT_84331
Entry
SELMODRAFT_84331  CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
smo  Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:smo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smo03016]
    SELMODRAFT_84331
Enzymes [BR:smo01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     SELMODRAFT_84331
Transfer RNA biogenesis [BR:smo03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    SELMODRAFT_84331
 Prokaryotic type
    SELMODRAFT_84331
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 9636025
NCBI-ProteinID: XP_002965606
JGI: 84331
UniProt: D8R403
Position
Unknown
AA seq 269 aa
KWRIVVSYDGTRFSGWQYQPDFPTVQGLIEDALTKLTRYTREELLMAAASRTDAGVHALG
QVAHFHSPACIGDLSRIHRGLNGTLPHEIRVREISPAKSSFHAQACARTKRYQYKLFVAP
VMDPLLRLYAYHVPERLDVAAMAEACGYFVGKHDFSTFSNSSTLRPLQNPVREILRFELL
EQASLGPVLCFEIEGTGFFHKQIRNMVGLIVAIGKGEHQARVIPELLAMKDRQKLARVSI
TAPSRGLTLVSVHYDQSDLDLPENLLCRK
NT seq 810 nt   +upstreamnt  +downstreamnt
aaatggaggattgtggtttcgtatgacggcactcgtttctctgggtggcagtaccagccg
gattttccaaccgtccaaggattgatcgaggatgcactgacaaagctaacgcgttacacc
cgagaagagctcctcatggcggccgcaagtaggacggatgctggagttcacgctctgggc
caggtcgcgcacttccattctcctgcttgtatcggcgacttgagccggatccatcggggc
ctaaacggcacgcttcctcacgagattcgtgttcgtgaaatctctccagcgaaatctagc
tttcacgcccaggcttgtgctcggacaaagaggtaccagtacaaacttttcgtggctcca
gtcatggatccactcttgcgcttgtacgcgtaccacgtacctgagaggctcgacgttgct
gctatggcggaagcttgcggctacttcgttgggaagcacgacttctcgacgtttagcaac
tcatcgacgctccggcccctgcaaaatcccgttcgagagatcttgcgtttcgaactgctg
gagcaggcaagcttgggtccagttctttgcttcgaaatcgaaggcacgggattcttccac
aagcaaataagaaacatggtgggattgatcgttgcgattggcaaaggagagcaccaggct
cgagtgattccagagctcttggctatgaaagatcgccaaaaactagctagagtttctatc
actgctccctcccgaggactcacgcttgtctccgtccactacgaccaaagcgatcttgac
ttgccggaaaatctactgtgtagaaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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