KEGG   Spirosoma montaniterrae: AWR27_17880
Entry
AWR27_17880       CDS       T04702                                 
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
smon  Spirosoma montaniterrae
Pathway
smon03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smon00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AWR27_17880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smon03019]
    AWR27_17880
   03016 Transfer RNA biogenesis [BR:smon03016]
    AWR27_17880
Enzymes [BR:smon01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     AWR27_17880
Messenger RNA biogenesis [BR:smon03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AWR27_17880
Transfer RNA biogenesis [BR:smon03016]
 Prokaryotic type
  tRNA degradation factors
   AWR27_17880
SSDB
Motif
Pfam: RNB CSD2 OB_RNB S1 Rrp44_S1 OB_Dis3 RNase_II_C_S1
Other DBs
NCBI-ProteinID: AQG81025
UniProt: A0A1P9X0C0
Position
4183198..4185633
AA seq 811 aa
MRNGKPKTNKYSRPSTSRSREKGVEKAGRPVIQADRFLDELKNDLIAFFQINGDDSFTQE
QVLDHFDVADRRMKLILHGLLGELLEEGSIVRQADGTYRADANANTVEGVVDHVNSRFAF
VIPTTVNGERSERDDHIWVSTDDLNGAVDGDRVRVIRFTDSRNRGRRIEGKVESVIERGR
TELVGRIEVWPAYGYVVADSKKIYDDIYIPKEKLGGANDDEKVIVRITKFPDALSSKQRF
EGEVITVLGVAGQNDTEMHAILAEFGLPINFPEDVEQEAEAIPTKILKKDLAKRRDMRDV
TTFTIDPVDAKDFDDALSVQVLDNGNYEIGIHIADVTHYVLPGSRLEEEAYKRATSVYLV
DRVVPMLPEKLSNGLCSLRPNEDKLTFSAVFELTPDARIVNEWFGRTAIHSNRRFSYEEA
QEILNTSAGDYLAELQLLNELAYKLRNERFKHGAINFETTEIRFRLDENGVPLGVYTKLR
QDTNKLIEEFMLLANKRVAEFVHSLSKQNKAGAENTMVYRVHEGPDEEKLRQFADFAARL
GYKLNVDEEKLSSSMNRFMASIEGKPEAGMLSQLAVRTMSKARYSTEDIGHFGLAFRRYS
HFTSPIRRYPDMMAHRLLQHYLDRGKPADREPLEDQCKHASAREKMASDAERASIKYKQV
EFMSRMPADQTFAGVISGVTEFGIFVEITENNCEGLVRMQDLSDDFYEFDKDNYRIIGSR
HKKMYTFGDAVEVRVKETNLARRSMDFMLVSDKAGHATDSGNRRSGRRDSERGSREGGAS
SRSSSSGRSSGKRSSGPAPKGENRRGGRGRR
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgagaaacggaaaacccaaaacgaataaatacagccgaccgagcacgtctcggtcgcgg
gagaagggtgtagagaaagcgggtcggcctgttatacaggccgaccgctttttagacgaa
ctgaaaaatgacctgatcgcctttttccagattaatggtgacgattcatttacgcaggaa
caggtactcgatcatttcgacgtggccgaccgacgcatgaaactcatcctgcacggtctg
ctcggcgaactgctcgaagaagggtcgattgttcggcaggccgatggcacataccgcgcc
gatgccaacgctaacaccgttgaaggcgtggtcgatcacgttaattcgcgctttgcgttc
gtgattccaaccacagtcaatggcgaacgcagcgaacgcgacgaccatatctgggtatcg
accgacgaccttaacggggccgtcgatggcgaccgggtgcgcgtaattcgctttacagat
tcgcgcaatagagggagacgcatcgaaggcaaagtcgaaagcgttatcgagcgggggcgt
actgaactggtaggccgcattgaggtgtggccggcttacggctatgtagtggccgacagc
aagaagatttacgacgacatctacattccgaaagaaaagctcggcggtgccaacgacgac
gagaaggttattgttcgcatcacgaagtttcccgacgcgctgagcagcaaacaacgcttt
gagggcgaagtgattacagtgctgggagtggccgggcagaacgacaccgagatgcacgcc
attctggccgagtttggtttgcccatcaatttcccggaagacgttgagcaggaagccgaa
gccattccgacgaagattctgaaaaaagacctcgccaaacggcgcgacatgcgcgacgta
acaacgtttaccatcgacccggttgatgccaaagactttgacgacgcgctctcggtgcag
gtgttagacaacggcaactacgaaatcggtattcacattgccgacgtaacgcactacgta
ctgcccggctccaggctcgaagaggaagcctataaacgggctacgtcggtttatctggta
gatcgcgtggtgccgatgttgcccgaaaaactctcgaacggcctgtgttcgctgcggccc
aacgaagacaaactgactttctcggcggtgtttgagctaacccccgacgcccgcatcgtg
aacgaatggtttgggcgcacggccattcactcgaaccggcgattcagctacgaagaagcc
caggaaatactgaatacgagcgcaggcgattatctggccgaactgcaactactcaacgaa
ctggcttataagctacgcaacgagcgattcaagcatggtgctatcaattttgagaccacc
gaaattcggtttcggctcgatgagaacggcgttccgctgggcgtatataccaagttgcgg
caggataccaacaaactcatcgaagagtttatgctgctggcaaacaagcgcgtggccgag
tttgtgcattccctctcgaaacagaataaagcaggggcggagaacacgatggtgtaccgc
gttcacgaaggccccgacgaagaaaagctacgccaattcgctgattttgccgcccgcctg
ggctataagctgaacgttgacgaagaaaagttatcgagttcgatgaaccggtttatggcg
agtatcgaagggaaacccgaagccggtatgttgtcgcaactggccgttcgaaccatgtcg
aaagcgcggtatagcacagaagacatcggccactttgggctggcgtttcggcggtattcg
cactttacctcgcccatccgtcgctaccccgacatgatggcccaccggctgttgcagcac
tacctcgacagaggcaaacccgccgaccgcgaaccactcgaagatcagtgcaaacacgca
tcggcccgtgagaaaatggcgtccgatgccgaacgcgcaagtattaaatataaacaggtc
gaattcatgagccggatgcccgccgaccaaacgttcgccggggtaatttcgggcgtgacg
gagttcggcattttcgtagaaattaccgaaaacaactgcgaaggtctggtgcggatgcag
gacctgagcgacgatttctacgagttcgacaaggacaattaccgcatcatcggcagtcgg
cacaagaaaatgtacacctttggcgacgccgtagaagtacgcgtcaaagaaaccaacctc
gcccgccgaagcatggatttcatgctcgtgagcgacaaagccggtcacgcaaccgattcg
ggcaaccgccggtcgggtcggcgcgatagcgaacggggttcgcgggagggcggggcatcg
tcgcgttcgtcttcttcgggtcgttcgtcgggtaaacgtagcagtggccccgcgcccaag
ggcgaaaatcggcggggaggccggggcagacggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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