KEGG   Sordaria macrospora: SMAC_03612
Entry
SMAC_03612        CDS       T01610                                 
Symbol
putative_msh56
Name
(RefSeq) putative MSH6 protein
  KO
K08737  DNA mismatch repair protein MSH6
Organism
smp  Sordaria macrospora
Pathway
smp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:smp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    SMAC_03612 (putative_msh56)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smp03400]
    SMAC_03612 (putative_msh56)
DNA repair and recombination proteins [BR:smp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     SMAC_03612 (putative_msh56)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II MutS_IV DUF5740 AAA_27 AAA_29 AAA_23
Other DBs
NCBI-GeneID: 10808888
NCBI-ProteinID: XP_003351308
UniProt: F7VVP0
Position
Unknown
AA seq 1230 aa
MGDKSSTPARTPARTPSTVKRSGLASTGRQSSILGFFSKTAVSATPTNATSNANSNANST
VTASSPASDATATPRPGQKEKSPECLKETTKSNSILPPRRRRGLDETPVPSSDAVLPPSS
QENPGTAYSKDDDTKTIMMPSKSSDDDGDDVFLSFSGRPKSSRQSRARSRPKVIDEDDED
DAFEMDETVVNEDEDDEMADFVVEDDESDEGASKSKKRKRPTARPSAPRKKSAMSSLPGP
RPSTRQEEDDEDEEMMDDVPRTSTALKWKYDPDNIQPAESRSVAPRTAPTSSSAKTKPKA
HTREPEQRYPWLADIQDANRNRPGHPDYDPGSVYVPPSAWRQFSPFETQYWEIKKNLWDT
VVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLEMWVNQFVAKGYKVAR
VDQMESALGKEMRERDTKAKKADKIIRRELACILTGGTLVDGSMLQDDNAVYCAAIKESV
IDDKPAFGIAFVDAATGQFFISEFEDDVDLTKFETFVAQTSPRELILEKSHLSTKALRIL
KNNTAPTTIWNYLKMGTEFWEADTTRRELDCSGYFVSGEGQDEVWPEKLKEARGKDLLMS
ALGALTQYLRMLKIERNLLSQGNFAWYNPIHRNGTLILDGQSLINLEIFANTANGGPEGT
LFHLLNRCITPFGKRLFRQWVCHPLCNIQKLNERLDAVDMLNDDRSFQEQFSSQMSKMAD
LERLISRIHAGACKPGDFVKVLEGFERIDRTMELLEAFGGGNGLVDRLIASMPNLKEPLG
YWKTAFDRKRARDDKLLIPEQGIVEDFDRSQEELDRIKGELQELLERQKTALRCKTAKFT
DVGKEVYQIEVPKTVKVPPKWRQMSATSAVKRYYFKELEDLVRELQEAEETHSQIVKEVA
SKFFKRFDLDYETWLQAIRIISQLDCLISLAKASSALGQPCCRPVFVDDERTVVEFNELR
HPCMLNTVDDFIPNDIKLGGDEANIDLLTGANAAGKSTILRMSCIAVIMAQIGCYVPAMS
ARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDG
VAVAQAVLHHVASHIGCVGFFATHYHSLATEFENHPEIRAKRMQIEVDEENKRITFLYKL
EDGVAEGSFGMHCAAMCGIPDKVIRRSEVAAKEWEHTSRLKESLDRAKTGCYIPLGVLSD
VASLLRSETGKEREVGDRGVEVLLRAIEAL
NT seq 3693 nt   +upstreamnt  +downstreamnt
atgggcgacaaatcttcaactccggcgcgcaccccggcaaggaccccatctaccgttaag
agatctggactggcctcgacgggcaggcagtcgagtattctcggattcttctccaagact
gccgtttctgcgactcctaccaatgcgacctcaaatgccaattccaatgccaatagcact
gtcacagcttccagtcctgcttctgatgccacagcaacacctcgccctggccaaaaggaa
aagtccccagaatgcctgaaagaaaccacaaaatccaactcgattctgccgcccagacgg
agaagggggcttgacgagaccccagtccctagtagtgacgccgttctaccccctagctcc
caggaaaacccaggcactgcctattccaaggatgacgacaccaagaccatcatgatgccc
agcaagtcgtcagacgacgacggcgacgatgtctttctctcattttcagggagaccaaag
agctctcgtcaatcacgcgctcgatcacgccccaaagtcatagacgaagacgacgaagac
gatgctttcgagatggatgagaccgtagtcaacgaggacgaagatgatgagatggcggac
tttgtagtcgaagacgacgaatccgatgaaggcgcctcaaagtccaaaaagagaaaacga
ccgacagcacgcccgagcgccccacgcaaaaagtcagccatgtcctctcttcctggtcct
cggccatcgacacgacaagaggaggatgacgaggacgaggagatgatggatgatgttccc
agaacctcaacagccctgaaatggaagtatgatccggacaacattcagccagctgagtct
cgatctgtcgctcctcgtaccgcaccaacatcgtcgtccgccaaaacaaagccaaaggca
cacacgagagagcctgagcagagatacccgtggctggccgatattcaagatgccaatagg
aaccggccaggacatccggattacgaccctggctccgtctatgtgcccccatctgcgtgg
aggcagttttcgccgttcgagacgcagtactgggagatcaagaagaacctatgggacacc
gtggtcttcttcaaaaagggcaagttctacgagctctatgagaacgatgccaccattggc
catcagctctttgacctcaagctcaccgatcgtgtcaacatgcgtatggttggtgttccc
gagagctcgctggaaatgtgggtcaatcagttcgtcgccaaagggtacaaggttgcccgc
gtcgaccaaatggagtctgccttgggcaaggagatgcgcgagcgtgacaccaaggccaaa
aaggcggacaagattattcgccgcgagctcgcttgcattctgacaggtggtactctggtg
gatggcagtatgcttcaagacgataacgccgtctattgtgcagccatcaaagagtctgtc
atcgacgataagcctgcatttggcatcgcctttgtagacgctgctactggacagttcttc
atctcagagtttgaggacgatgttgatcttaccaagtttgagacctttgtggctcagacc
tccccacgagagttgatcttggagaaatcacacctgtcgacaaaggccctacggattctc
aagaacaacactgctcctaccaccatctggaactatctgaaaatgggaaccgagttttgg
gaggctgacaccacaaggcgcgaacttgactgtagcggttactttgtctctggcgaaggc
caggatgaggtctggcccgagaaactcaaagaggcccgcggcaaagatctcttaatgtcc
gctctcggtgctctgacccagtatctgcgtatgctgaagattgagcgcaacttgctctcc
cagggcaactttgcctggtacaaccccattcaccggaacggcacacttattcttgacggc
cagtctcttatcaacctggaaatctttgccaatacagccaatggcggccccgagggaact
ttgttccatctgctaaacaggtgcataactcccttcggaaagcgactcttccggcaatgg
gtctgccatcctctctgcaacatacagaagctcaacgagagactggatgcggtcgacatg
cttaacgacgaccgaagctttcaagagcaattctcgtctcagatgagcaagatggccgat
ctggagcggttgatatcccgaattcatgctggcgcttgcaagcccggggactttgtcaaa
gttttggaagggtttgaacggattgaccgtaccatggaacttctcgaggcctttggtggt
ggtaatgggctggtcgaccgcctcattgcatccatgccgaacctcaaggaacccttgggg
tactggaagactgcgttcgataggaagagggcccgcgatgacaagcttcttattcctgaa
caaggcatagtagaagactttgaccgcagccaagaagaactggaccggatcaagggagag
ctgcaggagcttcttgagaggcaaaagactgctcttaggtgcaagaccgcaaagttcacc
gacgttggcaaagaagtctaccagattgaagttcccaagacagtgaaggttcctcccaaa
tggcgccaaatgtccgcaacttcggcggtcaagcggtactacttcaaggagctcgaggat
cttgttcgtgagcttcaggaagccgaagaaacacattctcagatcgtcaaggaagtcgct
tcgaaattcttcaagcgcttcgatctcgattatgagacatggttgcaggcaattcgcatc
atttcgcaactggattgtctcatcagtctggccaaagcgtcatcggctcttggtcaacct
tgctgccgcccagtgtttgtggatgatgagcggaccgttgtcgagttcaacgaactacgc
catccttgcatgctaaacaccgttgacgattttatcccgaatgacatcaagctgggtggt
gatgaggcaaacattgaccttcttaccggcgcaaatgcggctggcaagtccacaattctt
cgaatgtcctgcatcgctgtgattatggcccaaatcggttgttacgttcctgccatgtcc
gcccgcctgacacccgtcgaccgcattatgtctcgtttgggcgcgaatgacaacatcttt
gccgcgcaatccacattctttgtcgagctgtccgagacgaagaagatcctgtcagaagcc
actccccgttcactagttattcttgacgagcttggacgtggcacatcttcatatgacggt
gttgccgtcgcccaggcagttctgcaccacgtcgcatcacacattggttgcgtcggtttc
ttcgccacacactatcacagtcttgctaccgagttcgagaatcatcccgagatccgtgcc
aagagaatgcagattgaggtggacgaggagaacaagagaatcacctttctgtacaagctc
gaggacggcgtcgcagaaggctcattcggtatgcattgcgcagccatgtgtggtattccc
gacaaggtgattcgaagatccgaggttgcagcaaaggagtgggagcatacgagccgattg
aaggagagcctggacagagcaaagacgggctgctatattccgctcggagtgctgagcgat
gtggccagtctgctgaggagcgaaactgggaaggagcgggaagtcggcgacaggggcgtg
gaggttcttttgcgggctatcgaggctctttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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