KEGG   Sordaria macrospora: SMAC_06162
Entry
SMAC_06162        CDS       T01610                                 
Name
(RefSeq) uncharacterized protein
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
smp  Sordaria macrospora
Pathway
smp03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:smp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SMAC_06162
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smp03021]
    SMAC_06162
Enzymes [BR:smp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SMAC_06162
Transcription machinery [BR:smp03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     SMAC_06162
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_4 RNA_pol_Rpb1_3 TRM13
Other DBs
NCBI-GeneID: 10802193
NCBI-ProteinID: XP_003344876
UniProt: F7W681
Position
Unknown
AA seq 1474 aa
MGAERRAPIKEQLADQLPKRFRALQFGVQSHQDIVNQGVLEVSDNLLYDVENGRRTFPHG
PLDPRLGTSSKTGTCETCNLPLQSCAGHFGHVRLPLPVFHIGYLKYIQATLQNICKTCSK
VLLEEEPKAKFLKALRAPGIDNLKRSAILKKINDECRKQKTCPYCGDTQGVIRKLSVMKL
THDKFSHFNKSTAQKKVPPVAKAAFDSSFIQAKTFTPDLEKHSKKAMDDMDPLKVLKLFK
KITAEDCELLGLNPSEGRPEMFLWQYLPAPPICIRPSVQQEAASNEDDITSKLSEIILYA
GHLRESLLKGAALNTIMEQWEFIQLQVGMYVNSDVPGLYQPGFGKPIRGFCQRLKGKQGR
FRGNLSGKRVDFSGRTVISPDPNLGIDQVAVPERVAKNLTYPERVNRNNIEKLRKCVMNG
PKVWPGAQGVIKRDGGMKFNLNFGDESIREERARELKFGDVVERHLEDGDIVLFNRQPSL
HKLSIMSHRAKVRPWRTFRLNECVCTPYNADFDGDEMNLHLPQTEEARAEAINLMGDFIT
AAYLLSSKDLFLDRKTFTYICTQMLLGETHLDLPPPTIIKPVEMWTGKQIFNVLMRPNKQ
SPVLVNLEAKNKVYKAKPGELPDMDIDDCYLVKNSVFYVILRDWGPEHAAQAMNRLAKLC
ARTLTLRGFSIGVGDVYPSKDLTEHKAKLVADAYALCDDLIAQFKSGRLEKAPGCNMEET
LENKISGILSKVRSQAGDYCVGHLSRNNSPLIMAKSGSKGSDINVAQMVALVGQQIIGGK
RVADGFQDRTLFHFHKNARQPPSKGFVRNSFYTGLVPTEFLFHAISGREGLVDTAVKTAE
TGYMSRRLMKSLEDLSTQYDDTVRTSEGNIVQFQYGADRLDPADMEGNAKPVDFERSWNH
AESLTMNHNERSLLPAEISAMCREILDERRKSYVRKHLVTGELLHYADKTIAESNDHDVF
IAIDEHEGARVYLNTIQAEMDKRALKLAKARRLAGLDPCLDQNNADLLKEFAAWEKKQNG
GDIKMLDPEEEEIQQAHVDRVAKVSEATLRKFMNLCLSKFDKAKVEPGHAVGAVGAQSIG
EPGTQMTLKTFHFAGVAGMSITQGVPRIKEIIGASKLISTPVISCELENNVDIKAARIVK
GKIEKTFISDVIQYVEDVWLPDVAKIVLKIDMQALSDMQLGIGLREIMVAIVKAKKLKLK
VEMDDLKIGPDNTIEAARVRAAAIEKGQLLLTTSDETAADFQLRVNFLKRMLPAVPISGY
PEAFRAIIQSSESNEHKVLVEGYGLRACMTTEGVIGTKCISNSIMECRDVLGIEAARTTI
AKEIGSVMGDMGIDPRHMDLLADVMTYKGEILGITRHGLAKMRDSVLQLASFERTPDHLF
DAAAGMKTDRILGVSECIIMGQTMKIGTGAFQVVRRLGIRDHQVRPKKSMFEEVWKKDEA
EKRKAKMEMRKVAAGRMGEKIDGMMPAAPMVAVA
NT seq 4425 nt   +upstreamnt  +downstreamnt
atgggtgccgagcggagagctcctatcaaggagcagctggccgaccagctccccaagcgc
tttagggccttgcagttcggagtccagtcacaccaggatatagtaaatcagggtgttctc
gaagtctccgataaccttctctacgacgtcgaaaacggccgccgcactttcccccacggc
cccctcgatcctcgcctcggtacctcgagtaagaccggcacctgcgagacctgcaacctc
cctctccagtcctgcgctggtcacttcggtcacgtccgcctaccgcttcccgtcttccac
attggttatctcaagtacatccaggccacactccagaacatctgcaagacctgctccaag
gttctgcttgaagaggaacccaaggccaagttcctcaaggctctccgtgcccctggcatc
gacaacctcaagcgatcagccatccttaagaagatcaacgatgaatgccgcaagcaaaag
acgtgcccctactgcggcgacactcagggtgttatccgcaagttgagcgtaatgaagctc
acccacgacaagttctcccacttcaacaagtcgaccgcccagaaaaaggtcccgcccgta
gccaaggccgccttcgattcctccttcattcaggcaaagacattcactccggatcttgag
aagcactccaagaaagctatggacgacatggaccctctcaaggtcttgaaactgttcaag
aagatcacggccgaggactgcgagttgctcggattgaacccttccgagggcagacccgag
atgttcttgtggcaatatcttcccgctcctcccatctgcattcgcccgtcggtccagcaa
gaagccgctagtaacgaagatgacatcacgagtaagctgtccgaaatcattctttacgcc
ggccatctgcgagaatcgctcctcaagggcgccgccctcaacaccatcatggaacagtgg
gagttcatccagcttcaggtgggtatgtacgtcaacagtgacgttcccggcctgtaccag
ccaggatttggtaagcccattcgtggcttctgccagcgtctaaagggcaagcagggtcgt
ttccgtggtaacctgtcgggtaagcgtgtcgacttctccggccgcacagtcatttcaccc
gatcccaacttgggaattgatcaggtcgctgttcctgagcgcgtggccaagaacctgaca
tatcccgagcgggtaaaccgcaacaacatcgaaaagttgcgaaaatgcgtcatgaatgga
cccaaagtctggcctggtgctcagggtgtcatcaagcgggacggcggcatgaagttcaac
ctaaacttcggtgacgagtctatccgggaggaacgtgcgcgggaactcaagtttggcgac
gttgttgagagacatttggaagatggcgacattgtgctattcaaccgtcagccctcgcta
cacaagttgtctatcatgagccatcgtgcaaaggttagaccctggaggacgttccgtctc
aacgaatgtgtgtgcacgccctacaacgccgatttcgatggagacgaaatgaaccttcat
cttccgcaaacagaagaggctcgcgccgaagccatcaacctcatgggtgatttcattacc
gcagcgtacttgctcagtagcaaagatttgttcctcgaccgcaagacctttacctacatc
tgcacgcaaatgttgctgggcgaaacccatctcgaccttccgccgcccaccatcatcaag
cccgtcgagatgtggacgggtaagcaaatcttcaacgttctgatgcgccctaacaagcaa
tcaccggtccttgtcaacctggaggccaagaacaaggtttacaaggcgaagcctggtgag
ctcccagatatggacattgacgactgctacttggttaagaactcggtgttctacgtcatc
ctccgtgattggggtccggaacacgctgcgcaggccatgaaccgcctggccaagttgtgt
gctcgcacactgaccctccgcggtttctcgatcggtgttggcgatgtctatccgtccaag
gacttgacggagcacaaggccaagctggttgcggatgcgtatgcactctgcgacgacctt
atcgcccagttcaagagcggaaggcttgaaaaggctcccggttgtaacatggaggagacg
ctcgagaacaagatctccggcattctcagtaaagtccgttcgcaggccggtgactactgt
gtcggtcatttgagtcgcaacaattctcccttgatcatggccaagtccggttccaaaggt
tccgatatcaatgtcgcccagatggttgcccttgtcggacagcagattattggtggcaag
cgtgtcgcggatggtttccaagatcgtacgctcttccacttccacaagaacgctcgtcag
ccccccagtaagggtttcgtgcgcaacagtttctacaccggtctggttcccaccgagttc
cttttccacgccatctctggtagagaaggtctggtcgatactgccgtcaagacggccgaa
acgggttacatgtctcgtcgtctcatgaagtcattggaggatctctcgacccagtacgat
gataccgtgcggacgtcagaaggaaacattgtgcagttccagtacggtgccgacaggctg
gatcccgcagacatggagggtaacgccaagcctgttgatttcgagaggtcatggaatcat
gccgaaagcttgactatgaaccacaatgagaggtcgctgcttccggcagagatctcggcc
atgtgcagggagattctggacgagagacgaaaatcgtacgtgcgcaagcaccttgtcacg
ggcgagttgctgcactacgcggacaagacgattgcggaaagcaacgaccacgatgttttc
attgcgatcgatgagcacgagggtgccagagtctatctcaataccatccaggctgagatg
gacaagcgtgcgctcaagctggcgaaagcacgcaggctcgccggcttggatccctgcctg
gaccaaaacaacgctgacctgctgaaggaattcgctgcatgggagaagaagcagaatggc
ggcgatatcaagatgctagatccggaagaggaggagatccagcaagcccatgtggatcgt
gtcgccaaggtttcggaggccaccctgagaaagttcatgaacctctgtctttccaagttc
gacaaggcaaaggtcgagcccggtcacgccgtcggcgccgtcggcgcccagtctattggt
gaacccggtacccagatgacactaaagactttccatttcgccggtgtcgccggtatgagt
atcactcagggtgttccccgtatcaaggaaattattggcgcctcgaagctcatcagcacg
cccgtcatcagctgcgagctcgagaacaacgtagacatcaaggccgcgcgcatcgtcaag
ggtaagatcgagaagacttttatttccgatgttatccaatacgttgaggatgtctggctt
cccgatgtcgccaagatcgttctcaagatcgacatgcaggctctttcagacatgcagctc
ggcatcggtcttcgtgagatcatggtcgccatcgtcaaggccaagaagctcaaactcaag
gtggagatggacgacctgaagatcggccctgacaacaccattgaggcagcgagagttcgt
gccgccgccatcgagaagggccagttgctcctcactacgtcggacgagaccgccgccgac
ttccagctgcgcgtcaacttcctcaagcgcatgctccccgccgtgcccatctccggctac
cccgaggccttccgtgccatcatccaatccagcgagtcaaatgagcacaaggtcctggtt
gaaggctacggcctgcgcgcctgcatgaccaccgagggcgtcatcggaaccaagtgcatt
tctaactccatcatggagtgccgcgacgtactaggcatcgaagccgcgcgtaccaccatc
gccaaggaaatcggctccgtcatgggcgacatgggcatcgatccccgtcacatggacttg
ctggccgacgtcatgacctacaagggcgagattctcggtatcacacgccacggtctcgcc
aagatgcgcgacagtgtgctgcagctggcctcgttcgagcgcacgcccgatcacttgttc
gatgcggcggccggcatgaagacggatcgcatcctcggtgtgtcggagtgtatcatcatg
ggccagaccatgaagatcggtacgggcgcgttccaagttgttcgcaggttgggtatcagg
gatcatcaggtcagacccaagaagtccatgttcgaggaggtgtggaagaaggatgaggcc
gagaagaggaaggccaagatggagatgaggaaggttgcggcggggcgtatgggggaaaag
attgatggcatgatgccggcagcgcccatggtggctgtcgcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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