KEGG   Serratia marcescens WW4: SMWW4_v1c39560
Entry
SMWW4_v1c39560    CDS       T02448                                 
Symbol
lysA
Name
(GenBank) PLP-binding diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
smw  Serratia marcescens WW4
Pathway
smw00300  Lysine biosynthesis
smw00470  D-Amino acid metabolism
smw01100  Metabolic pathways
smw01110  Biosynthesis of secondary metabolites
smw01120  Microbial metabolism in diverse environments
smw01230  Biosynthesis of amino acids
Module
smw_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:smw00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SMWW4_v1c39560 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SMWW4_v1c39560 (lysA)
Enzymes [BR:smw01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     SMWW4_v1c39560 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC
Other DBs
NCBI-ProteinID: AGE19743
Position
complement(4282659..4283921)
AA seq 420 aa
MPRPLHDTSTALNAANLLALPQRFGCPVWAYDADIISQRIAQLRHFDTIRFAQKACSNIH
ILRLMREQGVKVDSVSLGEIERALQAGFQPGGEPSEIVFTADVLDHATLARVSELKIPVN
AGSIDMLDQLGQVSAGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWYADLPQAVEKIRR
YGLKLIGVHMHIGSGVDYQHLERVCDAMVQQVIDLGHDISAISAGGGLSIPYQYGEEAID
TEHYFGLWNRARERIAAHLGHPVQLEIEPGRFLMAEAGVLVAEVRAVKDMGSRHFVLVDA
GFNDLMRPAMYGSYHHISLLPADGRDTSGQALRDTVIAGPLCESGDVFTQQAGGGVETRE
LPPVQIGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFENGEPRLIRRRQTIEELIALELI
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgccacgcccgttgcacgacacctccaccgcgttgaacgccgctaacctgctggccttg
ccgcagcgtttcggttgcccggtctgggcctatgatgcggacatcatcagccagcgcatc
gctcagctgcgccacttcgacaccattcgtttcgcgcagaaggcctgttcgaacattcat
attttgcgcttgatgcgcgagcagggtgtgaaggtggattcggtgtcgctgggcgagatc
gaacgggcgctgcaggccggttttcaaccgggcggcgaaccgagcgagatcgtgtttacc
gcggacgtgttggatcacgccacgctggcgcgcgtcagcgaattgaagatcccggttaac
gccggttccatcgacatgctggatcagctcggccaggtttccgcagggcacccggtgtgg
ctgcgcgttaacccgggatttggccacggccacagccagaaaaccaacaccggcggcgag
aacagcaagcacggcatctggtatgccgacctgccgcaggcggtggagaaaattcgccgc
tacggcctgaagctgatcggcgtgcatatgcatatcggctccggcgtcgattaccagcat
ctggagcgggtctgcgatgcgatggtgcagcaggtgatcgatctcggtcatgacatcagc
gccatttccgccggcggcggcctgtctatcccgtatcagtacggcgaagaggcgatcgat
accgaacactatttcggtttgtggaaccgggcgcgtgaacgcatcgccgcgcatctgggg
catccggtgcagctggagattgaacccggacgtttcctgatggcggaagcgggcgtcttg
gtggccgaagtgcgggcggtaaaagacatgggcagccgccacttcgtgctggtggacgcc
ggttttaacgatctgatgcgcccggcgatgtacggcagttaccaccatatttcgctgttg
ccggccgatgggcgcgatacctcggggcaagcgctgcgcgacacggtgatcgccgggccg
ttgtgcgaatccggcgacgtgtttacccagcaggcgggcggcggtgtggaaacccgcgag
ctgccgccggtgcagatcggcgattatctggtgttccacgataccggcgcctacggcgcg
tcgatgtcctccaactacaacagccgtccgctgttgcctgaagtgctgttcgaaaacggc
gagccgcgtttgatccgccgccgccaaaccatcgaagagctgatcgcgctggaacttatc
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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