KEGG   Sinorhizobium meliloti SM11: SM11_pC1179
Entry
SM11_pC1179       CDS       T01885                                 
Symbol
nodD2
Name
(GenBank) NodD2 nod box-dependent transcription activator
  KO
K14657  LysR family transcriptional regulator, nod-box dependent transcriptional activator
Organism
smx  Sinorhizobium meliloti SM11
Module
smx_M00664  Nodulation
Brite
KEGG Orthology (KO) [BR:smx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:smx03000]
    SM11_pC1179 (nodD2)
Transcription factors [BR:smx03000]
 Prokaryotic type
  Helix-turn-helix
   LysR family
    SM11_pC1179 (nodD2)
SSDB
Motif
Pfam: HTH_1 LysR_substrate
Other DBs
NCBI-ProteinID: AEH82252
UniProt: F7XFC7
Position
pSmeSM11c:complement(1075719..1076645)
AA seq 308 aa
MRFRGLDLNLLVALDALMTERKLTAAARRVKLSQPAMSAAIARLRTYFGDELFSMQGRDL
IPTPRAEALAPAVREALLHIQLSIIAWDPINPAQSDRRFRIILSDFMTLVFFERVVERLA
REAPGVSFELLPLDDDPYELLRRGDVDFLILPDLFMSSAHPKAKLFAEPLVCVGCPTNEQ
LLGDLSFERYISMGHVAAQFGRALKPSFEQWLLLEHGFKRRVELVVPGFTLIPPLLPGTN
RIAILPLRLVKYFEQTIPLRIVKHPLPPLWFTEAVQWPALHDKDPGNVWIRELLLQEASR
SEFQGEMS
NT seq 927 nt   +upstreamnt  +downstreamnt
atgcgttttaggggcctagatctaaacctcctcgtcgcgctcgacgcactgatgaccgag
cgcaagctcacggccgccgcacgcagggtcaagctcagtcaaccggccatgagcgcggct
atcgcgcgcctgcgcacctattttggcgacgagctgttttcgatgcagggccgcgatctt
atcccgacaccgcgtgccgaagcgctcgcccctgcggtgcgtgaggccttactgcacatt
cagctctccatcattgcttgggatccgatcaacccagcccagtcggatcgccgtttcagg
atcatcctttcggacttcatgacacttgtattctttgagcgggttgtggagcgcttggct
cgggaggctcctggcgtcagcttcgagttgctgccgctagacgacgatccctatgagctt
ctccggcgcggtgatgttgattttctaattcttccggacttgttcatgtcgagtgcgcac
cctaaagcgaagctgtttgccgagccactcgtgtgcgtcggctgcccgacgaatgagcag
ttgcttggggatctctctttcgaaagatatatatcgatggggcatgttgcagcccagttc
gggcgtgccttgaagccctccttcgaacaatggctattgctggagcacggcttcaagaga
cgtgtcgaacttgtcgtgccaggttttaccttgattccgccgttgctgccgggcaccaat
cgtatagccattctcccattgcgcctggtaaagtatttcgaacaaacgatacccctgcgg
atcgtcaagcatccgctgccacccctctggttcactgaggctgtccagtggcccgccctc
cacgacaaggatcccggaaatgtctggatccgggagttactcttgcaggaagcctcgcgc
agcgaatttcagggagaaatgtcttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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