KEGG   Stenotrophomonas maltophilia D457: SMD_3643
Entry
SMD_3643          CDS       T02061                                 
Symbol
mrdA
Name
(GenBank) Penicillin-binding protein 2 (PBP-2)
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
smz  Stenotrophomonas maltophilia D457
Pathway
smz00550  Peptidoglycan biosynthesis
smz01100  Metabolic pathways
smz01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:smz00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    SMD_3643 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    SMD_3643 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:smz01011]
    SMD_3643 (mrdA)
Enzymes [BR:smz01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     SMD_3643 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:smz01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   SMD_3643 (mrdA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer Ntox28 GP3_package
Other DBs
NCBI-ProteinID: CCH14156
Position
complement(4080436..4082511)
AA seq 691 aa
MIPRRQVKNPHAEAEQFRRRAALGFLGVLVCLLGLGSWYFKLQVLDHDVYATRSEANRIK
PRPVVPGRGMIYDRNGRLLAENVPAFRLDVTPDKVKDMDATLEGLAKIINISPEELEAFN
KSRKARRKFLPVTLKLRMSDEEMARFAVDRWRFPGVELEPYLTRRYPYGDLFAHIIGYVG
RVDDKDLEILGEGNAALTHIGKSGLERYYEQQLRGKVGYEQVETNVQGRAIRTIGRVAAQ
SGADLRLSIDADLQRAMVAAFGDQEGSAVAMDPRTGEVLAMVSLPSYDPNLFVNGISHAD
FKALNENPSRPQFNRLVLGGVAPGSTLKPLIGLAGLDSGVRRPEDKVLSTGMFYLPGTSR
GWGDAHRGGHGWTDLRKSIAESVNTYYYKLALDLGIERFDHYMEYYGFGQPTGIDLTGEI
GGILPSPAYKRKSRKEAWYPGDTVNISIGQGDWKVTPLQLARGVSGLADGQLRTPHLVIQ
QREGFDSDWSAMPAGESKPVSPNPANVQAVREGMMATMRPGGSGWRVAVGAPYVMAGKTG
TAQVISRKGTAAVNPKSLPMHLRHRALFVGFAPVENPVIAIAVAVEGGGYGGSAAAPIAR
KVFDAYLLGKMPEGMQPLDSERGTTAIGATAFDNEDAGARQAGDLAAAQLGEHPVLVGVP
APEPVPAPQPATPAAAVLPATPRPTVAEPVR
NT seq 2076 nt   +upstreamnt  +downstreamnt
atgatcccgcgccgccaggtcaagaacccgcacgccgaagccgaacagttccgccgccgc
gcggcgctgggcttcctgggcgtgctggtctgcctgctgggcctgggcagctggtacttc
aagctgcaggtgctggaccacgacgtctatgccacgcgctcggaagccaaccgcatcaag
ccgcggccggtggtgcccgggcgcggcatgatctacgaccgcaatggccgcctgctggcc
gagaacgtgccggccttccgcctggacgtgaccccggacaaggtcaaggacatggacgcc
accctggaagggctggcgaagatcatcaacatcagcccggaagagctggaagcgttcaac
aagtcgcgcaaggcgcgccgcaagttcctgccggtcacgctgaagctgcgcatgagcgac
gaggagatggcgcgcttcgcggtcgaccgctggcgcttccccggcgtcgagctggagccc
tacctgacccgccgctacccctacggcgatctgttcgcgcacatcatcggctacgttggc
cgcgttgatgacaaggatctggagatcctcggcgaaggcaatgccgcgctgacccacatc
ggcaagtccggcctggagcgttactacgagcagcagctgcgcggcaaggtcggctacgag
caggtcgagaccaacgtgcaggggcgcgcgatccgcaccatcggccgcgtcgccgcgcaa
tccggcgccgacctgcggctgtcgatcgacgccgacctgcagcgcgccatggtggccgcc
ttcggcgaccaggaaggctcggcggtggcgatggacccgcgcaccggcgaagtgctggcg
atggtcagcctgccgtcctacgaccccaacctgttcgtcaacggcatctcgcatgccgac
ttcaaggcgctgaacgaaaacccgtcgcggccgcagttcaaccgcctggtgctcggtggc
gtcgcccccggttccacgctgaagccgctgatcggcctggccggcctggattcgggcgtt
cgacgcccggaagacaaggtgctgtccaccggcatgttctatctgccgggcacttcccgc
ggctggggtgacgcccaccgtggcggccatggctggaccgacctgcgcaagtccatcgcc
gaatcggtcaacacctactactacaagctggcgctggacctgggcatcgagcgcttcgac
cattacatggagtactacggcttcggccagccgaccggcatcgacctcaccggcgagatc
ggcggcatcctgccgtcgccggcctacaagcggaagagccgcaaggaagcctggtacccc
ggtgatacggtcaacatcagcatcggccagggtgactggaaggtcaccccgctgcagctg
gcgcgcggcgtcagcggtctggccgacggccagctgcgcaccccgcacctggtgatccag
cagcgcgagggtttcgacagcgactggtcggcgatgccggctggcgagagcaagccggtc
agccccaaccccgccaacgtgcaggccgtgcgcgagggcatgatggcgaccatgcggccc
ggcggcagcggctggcgcgtggcggtgggtgcgccgtacgtgatggccggcaagaccggt
accgcgcaggtcatcagccgaaagggcacggcggcggtgaatccgaagagcctgccgatg
cacctgcgccaccgcgcgctgttcgtcggcttcgcaccggtggaaaacccggtgatcgcg
atcgcggtggccgtggaaggcggcggctatggtggttcggcggccgcgccgatcgcacgc
aaggtgttcgacgcctacctgctgggcaagatgcccgaaggcatgcagccactggacagc
gagcgcggcaccaccgccatcggcgccaccgcgttcgacaacgaagatgccggcgcgcgc
caggctggcgacctcgccgcggcgcagctgggtgaacatccggtgctggtcggcgtgccg
gcgccggaacctgtacccgcaccgcagccggcgacgccggccgccgccgtgttgcccgcc
acgccacgcccgaccgtcgcggagcccgtacgatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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