KEGG   Stackebrandtia nassauensis: Snas_5539
Entry
Snas_5539         CDS       T01194                                 
Name
(GenBank) exodeoxyribonuclease VII, large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
sna  Stackebrandtia nassauensis
Pathway
sna03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sna00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Snas_5539
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sna03400]
    Snas_5539
Enzymes [BR:sna01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     Snas_5539
DNA repair and recombination proteins [BR:sna03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     Snas_5539
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon Peptidase_S66 Fe-ADH
Other DBs
NCBI-ProteinID: ADD45170
UniProt: D3PWU6
Position
5886539..5887783
AA seq 414 aa
MLSHVTQPELAAATGPSTPESPWPVRVVSHKIGEWISRLGAVWAEGQITQISRRPGAGFV
FLTLRDPAAEVSLTVVTTRNVVDACDPPLRDGARVIVHGKPDWYPGRGTLSLRATEIRQV
GLGELLARLEKLKKLLAAEGLFAPERKRPLPFLPRRIGLITGRASAAERDVLENAKTRLP
SADFEVREVPVQGPQAVPKVLEALAELDADPAVEVIILARGGGSVEDLLPFSDETLCRAV
FAAKTPIVSAIGHEPDNPLVDFVADVRCSTPTDAGKRVVPDFAEERRGIDQARHRLRQAL
GGKIDRESQALAAMRSRPCLAQPSRIIDDRQDEITHARDRIRRAFTARLDKAAHDVTSLR
GHLRALSPQGTLDRGYAIVRRADGAVVRADTEVTASEDLRVRLARGELTVIVKE
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgctgtcgcacgtgactcagcccgaactcgccgcggccaccggcccctccacccccgag
tcaccctggccggtgcgggtggtcagccacaagatcggcgagtggatctcccggttgggc
gcggtgtgggccgagggccagatcacccagatcagccgccgccccggcgccggtttcgtg
ttcctgacgctgcgcgacccggccgccgaggtgagcctgacggtcgtgaccacccgaaac
gtcgtggacgcgtgtgatccgccactgcgcgacggcgcccgggtcatcgtgcacggcaaa
cccgactggtaccccggccgcggcaccctgtcgctgcgggccaccgagatccgccaggtc
ggcctgggcgaactgctggcccggctggagaaactcaagaagctactggccgccgagggc
ctgttcgccccggaacgcaagcgcccactgccgttcctgccccgccgcatcggcctcatc
accggccgcgcctcagcggctgaacgcgacgtcctggagaacgccaagacccggctgccc
tcggccgacttcgaggtccgcgaagtcccggtacaaggcccgcaggcggtgcccaaggtc
ctggaggccctggccgaactggacgccgaccccgccgtcgaggtgatcatcctggcgcgc
ggcggcggcagcgtcgaggacctgctcccgttctccgacgagaccctgtgccgcgccgtc
ttcgcggccaagaccccgatcgtgtcggcgatcggccacgaacccgacaacccgctcgtc
gacttcgtcgccgacgtccgctgctccacccccaccgacgcgggcaaacgcgtcgtcccg
gacttcgccgaggaacgacgcggcatcgaccaggcccgccaccggctccgccaggccctg
ggcggcaagatcgaccgcgaatcccaggcgctggccgccatgcgttcccgcccctgcctg
gcccaaccgtcccgcatcatcgacgaccgccaggacgagatcacccacgcccgcgaccgg
atccgccgcgccttcacggcccggctcgacaaggccgctcacgacgtcaccagcctgcgg
ggccacctgcgcgccctgtccccgcagggcaccctcgaccgcggctacgccatcgtccgc
cgcgccgacggcgcggtcgtgcgcgccgacaccgaagtcaccgcgtcggaggacctgcgc
gtccgcctggcccgcggcgaactgaccgtcatcgtgaaggagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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