KEGG   Sulfuriferula nivalis: SFSGTM_00300
Entry
SFSGTM_00300      CDS       T06628                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
sniv  Sulfuriferula nivalis
Pathway
sniv00300  Lysine biosynthesis
sniv00470  D-Amino acid metabolism
sniv01100  Metabolic pathways
sniv01110  Biosynthesis of secondary metabolites
sniv01120  Microbial metabolism in diverse environments
sniv01230  Biosynthesis of amino acids
Module
sniv_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sniv00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SFSGTM_00300 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SFSGTM_00300 (dapF)
Enzymes [BR:sniv01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     SFSGTM_00300 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: BBO99321
UniProt: A0A809S761
Position
complement(33984..34814)
AA seq 276 aa
MNIKFTKMHGAGNDFVVIDAINQTVNLSAEQIRHIADRHMGVGCDQLLLVERPTRDDADF
RYRIFNADGSEVEQCGNGARCFVRFVHDHSLTQQHEIRVETASGIIVPKLENDGRVTVNM
GAPRFEPVDIPFVATERALTYTLDVAGKDLTICALSMGNPHAVLLVDDVDTAPVTTSGAL
IEIHPRFPNRVNAGFMQIVDRSHIRLRVFERGAGETLACGTGACAAVVAGISLGLLDQQV
EVSTHGGTLTISWGGGNTPVWLTGPTVNVFEAEISL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgaatattaaatttaccaaaatgcatggtgccggcaatgattttgttgtcattgatgca
atcaaccagaccgtgaatctcagcgccgagcaaattcgccatattgccgacagacacatg
ggcgtaggttgtgatcagttgttgctggttgaacgccctacacgtgatgatgccgatttt
cgctatcgtatttttaatgctgatggtagcgaagttgaacaatgtggcaacggtgcccgt
tgttttgtacgttttgtgcatgaccatagcctgacacagcagcacgaaattcgcgtcgaa
acggcgtccggcatcatcgtgcccaaactggaaaatgatggtcgtgttaccgtcaacatg
ggcgcaccacgttttgaacccgttgacattccatttgtagcgacagagcgtgcgctcact
tatacgcttgatgttgccggtaaagatctgactatctgtgcactttccatgggtaacccg
catgcagtgttgctggttgatgatgttgataccgcacctgtcaccactagcggtgcgctt
atcgaaatacacccgcgcttccccaatcgagtcaatgctggatttatgcagatcgttgac
cgtagccatatccgtttacgtgtattcgaacgcggtgcaggtgaaaccctcgcctgtggc
acaggtgcttgtgcggcagtcgttgcaggaataagcttaggtttattggatcagcaagtt
gaagtcagcacccatggtggtacgctgactatttcatggggtggtggtaatacgcccgtt
tggctgactggccctactgttaatgtttttgaagccgaaatctcgttatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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