KEGG   Sphingomonas sp. NIC1: A7E77_08540
Entry
A7E77_08540       CDS       T04479                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K10857  exodeoxyribonuclease X [EC:3.1.11.-]
Organism
snj  Sphingomonas sp. NIC1
Pathway
snj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:snj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    A7E77_08540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:snj03400]
    A7E77_08540
DNA repair and recombination proteins [BR:snj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     A7E77_08540
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: ANC86934
Position
complement(1774271..1775029)
AA seq 252 aa
MRPQPQIVRVIDLETTGSAPPAHGVCEIGWQDVALGADGRWELQGEGGSILVNPGRAIPP
ITQAIHHILDEDVADAPWWHDVARRVLDPYPRRVALAAHRADFEQQFCTPSLTHGQEWIC
TWKCALRLWPDSPSFSNQVLRYYRRPEGLDQQRGLPVHRAFPDAYVTAHHLRDQLNEAGL
AQCLDWSRTPGLIPRVRYGPYRGKAWSELDHESLMAFLTDRDPDIRFTANAEMDRRSGGG
AVGRASAQDLLL
NT seq 759 nt   +upstreamnt  +downstreamnt
atgcgtccccagccccagatcgtccgcgtcatcgacctcgaaaccaccggcagcgcgccg
cctgcgcatggcgtgtgcgaaatcggctggcaggacgtcgcactcggcgccgatggccgc
tgggagctgcagggcgagggagggtcgattttagtcaatcccggccgcgccatcccgccg
atcacgcaggcgattcaccacatcctcgacgaggatgtcgccgatgcgccctggtggcac
gacgtcgcacgccgcgtgctcgacccctatccgcgccgcgtcgcgctcgccgcgcatcgg
gcggacttcgaacagcaattctgcacgcccagcctgacccatgggcaggagtggatctgc
acctggaaatgcgcgctgcgcctgtggccggacagtcccagtttttctaatcaggtgctg
cgctattatcgccgccccgaggggctcgatcagcagcgcggcctgcccgttcatcgcgcc
ttccccgacgcctatgtcaccgcgcaccacctgcgcgaccagttgaacgaggcgggcctc
gcgcaatgcctcgactggtcgcgcacgccggggttgatcccgcgcgtccgctacggcccc
tatcgcggcaaggcgtggagcgagctcgaccacgaaagcctgatggccttcctgaccgat
cgcgatcccgacatccgcttcaccgccaatgccgaaatggatcgccgcagcggtggcggc
gccgtgggacgcgccagcgcgcaggacctcttgctatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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