KEGG   Sphingomonas sp. NIC1: A7E77_16180
Entry
A7E77_16180       CDS       T04479                                 
Name
(GenBank) conjugal transfer protein TraJ
  KO
K03203  type IV secretion system protein VirB8
Organism
snj  Sphingomonas sp. NIC1
Pathway
snj03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:snj00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    A7E77_16180
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:snj02044]
    A7E77_16180
Secretion system [BR:snj02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   A7E77_16180
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: ANC88538
Position
unnamed1:complement(61016..61708)
AA seq 230 aa
MAIGVRDKDEDLKAYFAEAESWDRDRFVAAVRSRRIAWIVATVAIVFAAICAAAVLALSP
LKTVVPYVVTVDRSTGATEVTQELRGDKTITYDEAIRKYFLADYVRAREGWIPQAREEFF
RKVLALSAREEQNRWTAFYKKDNPDSPQNQFTANDAVFVAIRSVAFISPNVAQVRFIKRL
QRDQQIIETPAIATITFDVLSKPETESGRYANPLGFQVKTYRADVEVPTR
NT seq 693 nt   +upstreamnt  +downstreamnt
atggctatcggcgtgagggacaaagacgaggatctgaaggcatatttcgcggaagcggaa
agctgggatcgcgatcggttcgtggctgcggtccggtcgcgtcgcattgcctggatcgtc
gccactgtcgcgatcgtattcgccgccatctgcgcagccgcggtgctggcgctctcaccg
ctcaagacggtcgttccctacgtcgtcacggtcgatcgctcgaccggcgccacggaagtc
acccaggagctgcgcggcgataagacgatcacctatgacgaggcgatccgtaagtatttc
ctcgccgattacgtgcgcgcccgcgaggggtggattcctcaagcgcgcgaggagttcttc
cgcaaggttctggccctgtcggcacgggaggaacagaaccgttggacggccttctacaag
aaggacaatccggactccccgcaaaaccagttcactgccaatgacgcggtgttcgtggcg
atccgctccgtggccttcatctcgccgaacgtcgcgcaggtccgcttcatcaagcggctc
cagcgtgaccagcagataatcgagacgccggccatcgcgaccataactttcgacgtgctg
tcgaagccggagacggaatccggccgatacgccaatccgctcgggtttcaggtgaagaca
taccgggccgacgtggaggttccgacgcgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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