KEGG   Streptomyces nitrosporeus: CP967_26835
Entry
CP967_26835       CDS       T06889                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
snk  Streptomyces nitrosporeus
Pathway
snk00040  Pentose and glucuronate interconversions
snk01100  Metabolic pathways
snk02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:snk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    CP967_26835
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CP967_26835
Enzymes [BR:snk01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     CP967_26835
SSDB
Motif
Pfam: Pectate_lyase_4 DUF6223 Beta_helix
Other DBs
NCBI-ProteinID: QEU75118
UniProt: A0A5J6FF98
Position
6058498..6059841
AA seq 447 aa
MPARMRNVRAIAVVMGCASLALAVSVPAQAAHGHGHGNGHKGIERAVLPEGDGWAAAEGS
TTGGANATPDHVYTVTNRAELIAAFRDAGDAPKIVRIAGTVHGNSDANGTPIGCEDYQQD
GYTLEKYLAAYDPAVWGTEEVPSGPLEDARAASAKLQAAAVNVNVPSNTTLVGVGENPTV
IGASLQVKGVSNVIIRNINFEDTYDCFPQWDPTDGDNGAWNSEYDNLVVYGSDHVWVDHN
TFSDGDRPDAGQPYYFGQVYQQHDGLFDIVRGADLVTVSWNVLKDHDKTMLIGNSDKAGD
TDRGKLRVTLHHNLFKDVKERAPRVRFGQVDSYNNHFVATRGAAYGYTYGIGAESHLVAE
HNAFTVPKGFDKATILKKWSESSLTAGGNYVNGRKTDLIAVHNAGVPTEHLTEGAGWTPT
LRTKVNHPLVVPVLVGLKAGAGKARAN
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgcccgcacgcatgcgaaacgtccgcgccatcgccgtggtgatgggctgtgcctcgctc
gccctcgccgtgagcgtccccgcccaggccgcccacggccacggccacggcaacggccac
aaggggatcgagcgcgccgtcctccccgagggcgacggctgggccgccgccgagggctcc
accaccggtggcgcgaacgccaccccggaccacgtctacacggtcaccaaccgcgccgag
ctgatcgccgcgttccgggacgccggcgacgcccccaagatcgtcaggatcgcgggcacc
gtccacggcaactccgacgccaacggcaccccgatcggctgcgaggactaccagcaggac
ggttacaccctggagaagtacctcgccgcctacgacccggcggtctggggcaccgaggag
gtgccctccggcccgctggaggacgcccgcgcggcgtccgcgaagctccaggcggccgcc
gtcaacgtcaacgtcccgtccaacaccacgctcgtcggcgtcggcgagaacccgacggtc
atcggcgcgagcctccaggtgaagggcgtctccaacgtcatcatccgcaacatcaacttc
gaggacacctacgactgcttcccccagtgggaccccaccgacggtgacaacggcgcctgg
aactccgagtacgacaacctcgtcgtctacggctccgaccacgtctgggtcgaccacaac
accttcagcgacggcgaccgtcccgacgccggccagccgtactacttcggccaggtctac
cagcagcacgacggcctcttcgacatcgtccgcggcgccgacctggtcaccgtctcctgg
aacgtcctcaaggaccacgacaagaccatgctcatcggcaacagcgacaaggccggtgac
accgaccggggcaagctccgcgtcacgctgcaccacaacctcttcaaggacgtgaaggag
cgcgcgccccgcgtccgcttcggccaggtcgactcgtacaacaaccacttcgtcgccacc
aggggtgccgcctacggctacacctacggcatcggcgccgaatcgcacctggtcgccgag
cacaacgcgttcaccgtgcccaagggcttcgacaaggccaccatcctcaagaagtggtcg
gagtcctccctcaccgcgggcggcaactacgtcaacggccgcaagaccgacctgatagcc
gtgcacaacgcgggcgtccccaccgagcacctcaccgagggcgccggctggaccccgacg
ctccgcaccaaggtcaaccacccgctcgtcgtccccgtactcgtgggtctgaaggccggc
gccggcaaggcgcgcgccaactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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