KEGG   Streptococcus pneumoniae AP200 (serotype 11A): SPAP_1607
Entry
SPAP_1607         CDS       T01309                                 
Name
(GenBank) Superfamily II DNA and RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
snp  Streptococcus pneumoniae AP200 (serotype 11A)
Pathway
snp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:snp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SPAP_1607
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:snp03019]
    SPAP_1607
   03009 Ribosome biogenesis [BR:snp03009]
    SPAP_1607
Enzymes [BR:snp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SPAP_1607
Messenger RNA biogenesis [BR:snp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SPAP_1607
Ribosome biogenesis [BR:snp03009]
 Prokaryotic type
  rRNA helicases
   SPAP_1607
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Helicase_RecD AAA_22
Other DBs
NCBI-ProteinID: ADM85191
Position
complement(1512140..1513714)
AA seq 524 aa
MKFNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
EKIRTEEATIQALVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALKSGA
HIVVGTPGRLLDLIKRKALKLQDIETLILDEADEMLNMGFLEDIEAIISRVPENRQTLLF
SATMPDAIKRIGVQFMKAPEHVKIAAKELTTELVDQYYIRVKEQEKFDTMTRLMDVAQPE
LAIVFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQNKRLRVLRDFKNGNLDVLVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVAPNEMGYLQIIENLTKK
RMKGLKPASVEESFQSKKQVALKKIERDFADETIRANFEKFGKDARKLAAEFTPEELAMY
ILSLTVQDPDSLPEVEIAREKPLPFKPSGNGFGGKAKGGRGGRRGDDRRERDRRGNGRRD
EFKKGSRGNDRFDKEKRYRKDNKKPRNTLSEKQTGFVIRNKGDK
NT seq 1575 nt   +upstreamnt  +downstreamnt
gtgaaatttaatgaattaaacttgtctgctgatttgctagcagaaattgaaaaagctggt
tttgtagaagctagtcctatccaagaacaaactattcctttggcccttgaaggcaaggat
gttatcggtcaagctcagactggtacaggaaaaactgcagcctttggcttgcctaccctt
gaaaaaatccgtacagaagaagcgactatccaagctttggtcatcgctccaactcgtgaa
ctagctgtccaaagtcaagaagaactcttccgctttggtcgtagtaagggagtcaaagtc
cgttcagtatatggcggatcaagcattgaaaaacaaattaaggctcttaaatctggtgcc
catatcgtggtgggaactccaggtcgcctcttggacttgattaaacgcaaggccttgaaa
ttacaagacattgaaacccttatccttgacgaagcggatgaaatgcttaacatgggcttc
cttgaagacatcgaagccattatttcccgtgtacctgagaaccgtcaaactttgcttttc
tcagcaactatgccagatgccatcaaacgtatcggtgttcagtttatgaaagcccctgaa
catgtcaagattgcggctaaggaattgacaacagaattggttgaccagtactatatccgt
gttaaggaacaagaaaaatttgacaccatgactcgtctcatggatgtggcacaaccagaa
ctcgctattgtatttggtcgtaccaaacgccgtgtggatgaattgactcgtggtttgaaa
attcgtggcttccgtgcagaaggaattcatggcgacctagaccaaaacaaacgtcttcgt
gtccttcgtgactttaaaaatggcaatcttgatgttttggttgcgacagacgttgcagcg
cgtggtttggatatttcaggtgtgacccatgtctacaactacgatattccacaagatcct
gagagttatgttcaccgtatcggtcgtacaggtcgtgctggtaagtcaggtcaatctatt
acttttgttgctccaaacgaaatgggttaccttcaaatcattgaaaacttgactaagaaa
cgcatgaaaggtctcaaacctgcaagtgtagaagaatccttccaatcaaaaaaacaggta
gctctcaagaaaatcgaacgtgattttgcagatgaaaccattcgtgccaactttgagaaa
tttggtaaggatgctcgcaaattggctgctgagtttactccagaagaattggcaatgtat
atcttgagtctgacagtccaagacccagatagccttccagaagtggagattgcacgtgaa
aaaccactaccgtttaaaccatcaggtaatggtttcggtggtaaagctaagggaggtcgt
ggaggccgtcgtggggacgaccgtcgagagcgtgatcgccgtggcaatggtcgccgtgat
gagttcaaaaaaggaagtcgtggcaacgatcgttttgataaggaaaaacgttaccgtaag
gataataaaaaaccacgcaatactttaagcgaaaagcaaacaggctttgttattcgtaac
aagggcgataaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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