KEGG   Streptomyces noursei ATCC 11455: SNOUR_23210
Entry
SNOUR_23210       CDS       T04806                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
snr  Streptomyces noursei ATCC 11455
Pathway
snr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:snr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SNOUR_23210 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:snr03021]
    SNOUR_23210 (rpoB)
   03400 DNA repair and recombination proteins [BR:snr03400]
    SNOUR_23210 (rpoB)
Enzymes [BR:snr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SNOUR_23210 (rpoB)
Transcription machinery [BR:snr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SNOUR_23210 (rpoB)
DNA repair and recombination proteins [BR:snr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SNOUR_23210 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: ANZ17911
Position
5247304..5250789
AA seq 1161 aa
MAASRNASTANTNNGDSTAPLRISFAKIKEPLGVPNLLALQTESFDWLLGNAAWKGRVEA
ALESGQEVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKERDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGGDEPLDAGVLTTDDVIATIKYLVKLHAGETETIGENGNSIVVETDDIDHFG
NRRLRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQTNPLSGLTHKRRLSALGPGGLSRERAGLDVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRVNVFGFIETPYRKVVDGQVTEEVDYLTADEEDRFLIAQANAKLSDDLRF
AEQRVLVRRRGGEVDLVPADEVHYMDVSPRQMVSAATAMIPFLEHDDANRALMGSNMMRQ
AVPLIKAESPLVGTGMEYRCAVDAGDVIKAEKNGVVQEVSADYITVANDDGTYTTYRVAK
FTRSNQGTSFNQKVVVDEGARVIEGQVLADGPSTDEGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLSDLDERGIIRIGA
EVVAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPVEDMPFMEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASQGWDVSSLGEEWAQRLQAIGADQVEARTNVATP
VFDGAREDELAGLLENTIPNRDGDRMVLPSGKARLFDGRSGEPFPDPISVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq 3486 nt   +upstreamnt  +downstreamnt
ttggccgcctcgcgcaacgcctcgactgccaatacgaacaacggcgacagcaccgccccg
ctgcgcatctcttttgcgaagatcaaggagcccctcggggttcctaacctccttgcgctg
cagaccgaaagcttcgactggctgctcggcaatgccgcatggaagggtcgcgtcgaggct
gcgctggagagtgggcaggaagttcccaccaagtccggtctggaagagatcttcgaagag
atctccccgatcgaggacttctccgggtcgatgtcgctgacgttccgcgaccaccgcttc
gagcctccgaagaactccatcgacgagtgcaaggagcgtgacttcacgtacgcggctccg
ctgttcgtcaccgcggagttcaccaacaacgagaccggcgagatcaagtcccagacggtc
ttcatgggcgacttcccgctcatgaccaacaagggcaccttcgtcatcaacggcaccgag
cgtgtcgtggtgtcgcagctggtccgctcgccgggtgtgtacttcgacagctcgatcgac
aagacgtccgacaaggacatcttctccgccaagatcatcccgtcccggggtgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtgcgtatcgaccgcaagcgcaagcag
tccgtgaccgtcctgctcaaggcgctcggttggaccaccgagcagatcctcgaggagttc
ggcgagtacgagtcgatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctgcgcccgggcgagccgccgacccgcgaggccgcg
cagacgctgctggagaacctctacttcaaccccaagcgctacgacctcgccaaggtcggc
cgctacaaggtcaacaagaagctcggcggcgacgagccgctggacgccggtgtgctgacc
accgatgacgtcatcgccacgatcaagtacctggtcaagctgcacgccggcgagaccgag
acgatcggcgagaacggcaacagcatcgttgtcgagaccgacgacatcgaccacttcggc
aaccgccgtctgcgcaacgtcggcgagctgatccagaaccaggtccgtacgggtctcgcc
cgtatggagcgcgtcgtgcgcgagcgcatgaccacccaggacgtcgaggcgatcacgccg
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctgtcccagttcatggaccagaccaacccgctgtcgggtctgacccacaagcgtcgt
ctgtcggcgctgggcccgggtggtctctcccgtgagcgggccggtctggacgtccgtgac
gtgcacccgtcgcactacggccgcatgtgcccgatcgagacccccgaaggcccgaacatc
ggtctgatcggctcgctcgcgtcctacggccgcgtcaacgtcttcggcttcatcgagacg
ccgtaccgcaaggtcgtcgacggccaggtcacggaggaggtggactacctcaccgccgac
gaggaggaccgcttcctgatcgcccaggccaacgccaagctcagcgacgacctgcgcttc
gccgagcagcgtgtgctggtccgtcgccgtggcggcgaggtcgacctcgtccccgccgac
gaggtgcactacatggacgtctcgccgcgccagatggtgtcggccgcgaccgccatgatc
ccgttcctcgagcacgacgacgccaaccgcgcgctcatgggatcgaacatgatgcgccag
gccgttccgctgatcaaggcggagtcgccgctggtcggcaccggcatggagtaccgctgc
gcggtcgacgccggcgacgtcatcaaggccgagaagaacggtgtggtccaggaggtctcc
gcggactacatcaccgtcgccaacgacgacggcacgtacaccacgtaccgcgtcgccaag
ttcacccgttccaaccagggcacctccttcaaccagaaggtcgtcgtggacgagggcgcg
cgggtcatcgagggccaggtcctcgccgacggtccgtccacggacgagggcgagatggcg
ctcggcaagaacctgctcgtggcgttcatgccgtgggagggtcacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgtgacaccaagctcggccccgaggagatcacccgggacatcccg
aacgtctccgaggaggtcctctccgacctcgacgagcgcggcatcatccgcatcggtgcc
gaggtcgtcgccggcgacatcctcgtcggcaaggtcacgcccaagggcgagaccgagctg
acccccgaggagcgcctgctccgcgcgatcttcggtgagaaggcgcgcgaggtccgtgac
acctcgctgaaggtcccgcacggcgagatcggcaaggtcatcggcgtccgcgtcttcgac
cgcgaagagggcgacgagctgccgccgggcgtgaaccagctggtccgcgtctacgtcgcg
cagaagcgtaagatcaccgacggtgacaagcttgccggccgccacggcaacaagggcgtc
atctcgaagatcctgccggtcgaggacatgccgttcatggaggacggcaccccggtcgac
atcatcctcaacccgctgggtgtcccgtcccgaatgaacccgggacaggtcctggagatc
cacctcggctggctcgccagccagggctgggacgtctccagcctcggtgaggagtgggcc
cagcggctgcaggccatcggcgccgaccaggtcgaggcgcgcaccaacgtcgcgaccccg
gtcttcgacggtgcccgcgaggacgagctggccggtctgctggagaacaccatccccaac
cgcgacggcgaccgcatggtcctcccgtccggcaaggcgcggctgttcgacggccgttcc
ggtgagccgttcccggacccgatctcggtcgggtacatgtacatcctcaagctccaccac
ctggtcgacgacaagctgcacgcccgctcgaccggtccgtactcgatgatcacccagcag
ccgctgggtggtaaggctcagttcggtggtcagcgcttcggtgagatggaggtgtgggcg
ctggaggcttacggcgccgcatacgccctccaggagctgctgacgatcaagtccgacgac
gtcaccggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccccgagccc
ggcatccccgagtccttcaaggtgctcatcaaggagatgcagtccctgtgcctcaacgtg
gaggtgctgtcctcggacggcatgtccatcgagatgcgcgacaccgacgaggacgtcttc
cgcgctgcggaggagctcggcatcgacctgtcccggcgcgagccgagcagcgtcgaagag
gtctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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