KEGG   Streptomyces nigra: DC008_24970
Entry
DC008_24970       CDS       T05839                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
snz  Streptomyces nigra
Brite
KEGG Orthology (KO) [BR:snz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:snz03032]
    DC008_24970
   03036 Chromosome and associated proteins [BR:snz03036]
    DC008_24970
   03400 DNA repair and recombination proteins [BR:snz03400]
    DC008_24970
DNA replication proteins [BR:snz03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    DC008_24970
Chromosome and associated proteins [BR:snz03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    DC008_24970
DNA repair and recombination proteins [BR:snz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      DC008_24970
SSDB
Motif
Pfam: Bac_DNA_binding HC2
Other DBs
NCBI-ProteinID: AWE52626
UniProt: A0A2S1IJ57
Position
5359953..5360606
AA seq 217 aa
MNKAQLVEAIADKMGGRQQAADAVDHVLDAIVRAVVAGERVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPRGGEVSVKKAPKGSLSGGASATVKK
AAAKKTTKAAAKKTTGAAKKTTAKKTTATAKKTAAKKAPAKKTTTAAAKKTTAKKTTATA
KKTAAKKAPAKKATAKKAPAKKSTARKTTAKATARKR
NT seq 654 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgtagaagcgattgccgacaagatgggcggccgccagcaggcc
gccgatgctgtcgaccacgtactggacgccatcgtccgcgccgtcgtggcgggggagcgg
gtgtcggtcaccggcttcggttcgttcgagaaggtcgaccgcccggcccggtacgcccgc
aaccctcagacgggcgagcgggttcgggtcaagaagacctcggttccccgcttccgcgcc
ggtcagggcttcaaggacctggtgagcggctcgaagaagctgccgcgcggcggagaggtc
tccgtgaagaaggcgcccaagggcagcctgtccggcggtgcctcggccacggtcaagaag
gccgccgccaagaagaccaccaaggccgccgcgaagaagacgacgggcgccgccaagaag
acgacggcgaagaagaccaccgcgaccgcgaagaagacggctgcgaagaaggcgcccgcg
aagaagacgacgacggccgccgcgaagaagacgacggcgaagaagaccaccgcgaccgcg
aagaagacggccgcgaagaaggctccggccaagaaggccaccgccaagaaggcgcccgcc
aagaagtcgacggctcgcaagaccaccgccaaggcgaccgcccgcaagaggtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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