KEGG   Solenopsis invicta (red fire ant): 105196536
Entry
105196536         CDS       T03916                                 
Name
(RefSeq) CLIP-associating protein 1-A isoform X5
  KO
K16578  CLIP-associating protein 1/2
Organism
soc  Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:soc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:soc03036]
    105196536
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:soc04812]
    105196536
Chromosome and associated proteins [BR:soc03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Microtubule-associated proteins
     105196536
Cytoskeleton proteins [BR:soc04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Cytoplasmic linker proteins (CLIPs)
     CLIP-associating proteins
      105196536
SSDB
Motif
Pfam: CLASP_N XMAP215_CLASP_TOG CEP104-like_TOG HEAT Vac14_Fab1_bd HEAT_2 Cnd1 Adaptin_N HEAT_EZ MMS19_C Arm PDS5 ParcG Sec7-like_HUS Ecm29 Ipi1_N Sec6 DUF5691
Other DBs
NCBI-GeneID: 105196536
NCBI-ProteinID: XP_011160823
Position
6:7652475..7701865
AA seq 1446 aa
MAMNPRDMDGFMPLLSTTDIKKKLNVGSALLNYLGDSSKSIECQDIGMFIDNIIPWLGNG
NPKVVQNGLEILTYLADRMGHDFKPYISTIIQPTIDRLGDSKDATREKAQLVLLKIMEKG
CMSPQNLLDRLRPTFNHKNAKLREEVLILLTTTLNEHGADEMALSGVIPSIVKLLSDPSE
KVRETALNTLADIYRHVGERLRVDLQRKHNVPQAKMLLLIEKFDQLKAAGDLLPLAMSSD
VGKDSDELDRAIKSAPVKRLNMPPPPKRGQFGPARTPSSALAPSGTSSYTVPRATTVKRA
LSVRSASSAQAGAIDEECFIAAFEDVPPVNIFSAKDLEEHMKIIKDTVGDDKKDWKQRID
SLKKLRAIIVAGGTNYENFHECLKNIQRPFEAACTDLRSQVVREACITLAYLSLSLKSKF
ASFGETILLTLMNLIQNSAKVVASAGGVAVRFILQNTHCSRYVPIIISCVSNKSKDIRKV
SCEYLALILQTWPTQILQKHVTILSDALKKGIADSDAEARAFARKSYWAFKNHFPEQAEI
LLNTLDASYKRSLMSLSNSGSSNSLNVVANARSSSVSPRTARPVMSAADRGTPGVRSTSA
IDLQAAQRAKARLMYANMSRQKAAALPRPSKSPDPIAIASPERIARTRTRVSGVSQSQPS
SRSGSPSSRLSYATYNREGDSLIGRPRRLSGHTIGSTSNSREPSPQRFGMDRSYASKLRG
RNLHMSPTDSSRPPVMAQKMLQKSREAESALADALTFDSIDNYTRIPGNKGDHSDDSENS
SICSERSIDGFRRASDSFSWSGSQPRLYRDLWDQSIPKDIKEIIENCGHKHWGDRKEGLV
GLQHYLSSGNTLTTTDLRRVTDIFTKMFMDSHTKVFSLFLDTLNELIITHNEGLGDWLYV
LCARLLNKLGTDLLGSIQTKIHKTLDVVRDCFPGQQLLPAVMRYLTDPTQTPNSRVKVAA
LTFITQIAETAEPSALGSSAATALARLLDWSNDGKSHDVRRHAQNAVISLYNLNPPQVTM
ILSELPKYYQETAWPLVQNHLRKSSASSNPASPGTPPPRAQNSPARTKAKNDIKADAKTE
IDGGDENLEEVYNFSHRSLRRTTAEIQNYGFERLERATTSKDSGISNMADVEERMEGLTL
SNSGRSSSVSSPTQRGRSVSNITVNGSDTIAGDLILPQENNGYKTHGSSPDSINRPEIVD
NMVKTLQSKVTQTSEKVSSLQEFQLYVREGDSSYIKRNFKKVLKVLLDSLSNDGKVIQVE
VLQTLIDMLKCSELIESFSSYNELLVLKVIYAYKSDDQKVDTSSGSGGRSPVHWNAEKCA
ATMAMVLKPEQIIHLVSTIIATETYPLNMGAIKMLHKVVEHWGREAIEPHLAKVMPGLIK
AYDDAESAVRKSAVFCMVAIHVAVGEEVLKPHLSSLYSSKLKLLNIYIQRAQQANSQPAS
PRNNKN
NT seq 4341 nt   +upstreamnt  +downstreamnt
atggcgatgaatcctcgtgatatggacggcttcatgccgctcctgtcgacgacggacatc
aagaaaaaactcaacgtcggtagcgcgctcctcaactacctcggtgactcgagcaagagc
atcgagtgtcaggacatcggcatgttcatcgacaacatcataccgtggctcggcaatggc
aatcccaaggttgtccagaatggtttggagatcctcacgtatctcgcggatcgaatgggt
cacgacttcaaaccttacatctccactattatccagccaacgatagacaggctaggtgac
agtaaggatgctaccagggagaaggcgcaactggtgcttctgaaaattatggagaaagga
tgcatgtcgccgcagaatcttctggacagacttcgtccaaccttcaatcacaagaatgca
aaattacgagaggaggttttaatcctgttgacgacgacgctgaacgagcatggagcagac
gagatggcactgtcgggagtgatcccgagcatcgtgaagctgctgtccgatccctcggaa
aaggttcgggaaaccgctctgaacacgctggcggacatctatcgacacgttggcgagaga
ttacgcgtcgatctgcaaagaaagcacaatgtgccgcaagccaaaatgctcctgctaata
gagaagttcgatcagctgaaggccgccggtgatctcttacccttggcaatgtcgtccgac
gttggcaaagacagcgacgaactcgatagagcgatcaagtcggctcccgttaagaggctg
aacatgcctcctcctccaaaaagaggtcaatttggacctgctagaacaccatcctctgcc
ttagctccttctggtacatcatcctacacggtcccaagggcaacgaccgtcaaaagagct
ctgtccgtaagatcggcatcatcagcgcaagccggagctattgacgaggaatgctttatt
gctgcattcgaggacgtgcctcccgtcaatatattctcggcgaaagacctcgaggaacat
atgaagattatcaaggataccgtgggtgacgataaaaaggactggaaacagagaatagat
agcttgaaaaagttaagagccattatagtcgcaggtggcactaattacgaaaatttccac
gagtgcctaaagaacatacagcgaccattcgaggcggcctgcaccgaccttagatcccaa
gtagtgcgagaggcgtgtataactctcgcttatctgagtttgagcctgaagagcaaattc
gccagttttggcgaaacgattttgctcacgttaatgaacctcatacagaacagtgccaag
gtcgtggcgtcagctggtggggtggcagttcggtttatccttcaaaacacccattgcagt
cgatatgtgcctattattatatcgtgcgtgagcaacaagagcaaagatattcgcaaggtg
tcctgtgaatatctggctctaattctgcagacctggcctacgcagatattacagaagcac
gtaacaatattgtcggacgcgctcaagaagggcatcgcggattccgatgcggaagcgcga
gccttcgccaggaaatcatactgggcatttaaaaatcactttccagagcaggctgagata
ttacttaatactttggatgcatcgtacaaacgctccctgatgtctctcagcaatagcggc
agtagtaatagcttaaatgtcgtggctaatgcgagatcgtcgagcgttagtccacgtaca
gcaagacccgtgatgagcgcggcagaccgaggtacaccaggggttagatctactagtgcg
attgatttgcaagctgctcagagagcgaaagcgaggttgatgtacgcgaatatgagcaga
cagaaagcagcagcacttcctcgtcctagtaaatctccagatcccattgcgattgctagc
cccgaaagaattgcaaggacgagaacaagagtgtcgggagtttcacaatctcaacctagc
agtagatcgggttccccgtcgtctagattaagttacgccacatataatcgcgaaggcgat
tcactgatcggcagaccgaggcgattatccggacacaccattggcagcacgagcaatagt
cgcgaacccagtccgcaaagattcggaatggacaggagttacgcgagcaaactgagaggg
aggaacctacacatgtcgccaacggacagcagcaggccgccagtgatggcgcaaaagatg
ttgcagaagtcgcgcgaagcggagtccgctttggcggatgctttaactttcgatagtatc
gacaattacactagaatacctggcaacaaaggggatcacagtgacgacagcgagaatagc
agtatatgctcggaaagaagcatagacggttttagacgagccagtgattcgttctcatgg
agtggctctcaaccgagactataccgtgatctatgggatcagtctatcccaaaggacatt
aaagagattattgaaaattgtggtcacaaacattggggagacagaaaagaaggcttagtg
ggtttgcaacattatttgagcagcggaaatactttgacaacaacagatttacgtagagtg
acagatatttttacaaaaatgtttatggattcccacactaaggtgttcagtttattcttg
gacacgttaaacgaactaataattactcacaacgaaggtcttggcgactggttatatgtt
ttgtgcgcgagacttcttaataaattgggcactgatttattgggatcaatacaaacaaaa
attcacaaaacgcttgacgttgtgagagactgtttcccgggccaacagctcctaccagct
gtgatgaggtatctgacagatccaacacaaacaccaaattctcgcgtgaaagtagcagca
ttgacttttatcactcagatcgctgaaacggcagaaccgtccgcgctgggcagttctgca
gcgacagcacttgcacgattactcgactggtcgaatgacggtaaaagccacgacgtgagg
agacacgcgcagaacgctgtgatatcactttacaatcttaatccgcctcaagttactatg
atactctcggagttaccgaaatactatcaagaaacagcctggcctctggtacagaaccac
ctgaggaaatcgtccgcatctagtaatccggcgtcacccggtacaccacctcctagagca
caaaattcgccagctcgaacgaaagcgaaaaatgacattaaagcggatgcgaagactgaa
attgatggaggtgatgagaacttggaggaagtatacaatttttcccacagatctttgcga
cgcacgactgctgaaattcaaaattatggctttgaacgtttggagagagctaccaccagt
aaagacagtggtatcagcaatatggcagatgtagaagagagaatggaaggtcttacgtta
tccaattctggtcgatcttcatccgtttcttcaccaacgcaacgaggacgatctgtcagt
aatataactgttaacggatccgatacgattgccggtgacttgattctacctcaagaaaat
aatggttataagacgcatggatcatcaccagattcgataaacagaccagaaatcgtagat
aatatggttaaaactctgcaatcaaaagtgacgcaaacctcggagaaagtatcatcgttg
caagaatttcaactatatgtccgcgaaggcgattcgtcatatattaaacgaaatttcaag
aaagtgctcaaagttttgttagatagcttatccaatgacggtaaagtgatacaggtggaa
gtgctgcaaacgctgatcgatatgcttaaatgttctgagttgatagaaagcttttcctcg
tataatgagttactggtattgaaagttatctatgcctacaaatcggacgatcaaaaagtt
gatacttccagtgggagtggcggcagatctccagttcattggaatgcggagaagtgcgcg
gcaacaatggccatggtcttaaagccagaacaaattattcacttagtctctactataatc
gctacggagacgtatccgttgaacatgggcgcgataaaaatgttgcacaaagtggtagag
cattggggtcgggaagctattgaacctcatcttgccaaagttatgcctggtcttatcaag
gcttacgatgacgccgagagcgccgttcgcaagagcgcggtcttctgcatggtggcgatt
cacgtcgcggtcggcgaggaggtgctgaagccgcacttgagttccctgtactccagcaag
ctcaagttgctaaacatctatatacaacgcgcgcaacaagcaaacagccaacccgcgagt
ccacgcaataacaaaaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (71)   
   KEGG ORTHOLOGY (1)   
   RefGene (67)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (10)   
   RefSeq(pep) (10)   
DNA sequence (12)   
   RefSeq(nuc) (10)   
   GenBank (1)   
   EMBL (1)   
Protein domain (18)   
   Pfam (18)   
All databases (115)   

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