KEGG   Solenopsis invicta (red fire ant): 105201524
Entry
105201524         CDS       T03916                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
soc  Solenopsis invicta (red fire ant)
Pathway
soc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:soc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105201524
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:soc03021]
    105201524
Enzymes [BR:soc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     105201524
Transcription machinery [BR:soc03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     105201524
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpa2_4 RNA_pol_Rpb2_2 Rpr2 RNA_pol_Rpb2_4
Other DBs
NCBI-GeneID: 105201524
NCBI-ProteinID: XP_025990315
Position
1:complement(31750093..31756846)
AA seq 1125 aa
MNLSNMLVEPKLTNTSPNFGRSPDTQNEILQSLGTPHIESFNYMLEDGLYQNLKDNTPVY
VTLPNSDKIVLWLDDVHIYKPAAPTNTIGLKSYKIYPSECRQRGVTYKGKIIARIGWSIN
GKEQEILEKDLGEVPIMLKSNRCHLNKMSPKELVAHGEHEQEWGGYFIIKGLERLVRMLI
MTRRNYPIAVKRPIWKGRGEQFSDLGILLRSVRDDNSTVNNTLHYVTDGSAKFAFAYKKA
TYYVPLILMLKCLKDVTDLCIYKALLAGCEDDLYYNNSIMNMLRAVHEEGLHWHEQCKAY
IGKMFRVKFSELPEDATDIDVCDYIVKNCVAIHLDEPADKFDLLVFMTKKLFAFSNNKCA
VEGVDSVMMQECLMGGHLYLQVLNEKLCSWLVGVKHHILKRAKSAGNRYTLSVQEMLNVT
KLRCNIDAQMEYFLSTGSIRSSSGLGLTQSSGLTIVVENINRMRYMSHFRAIHRGAFFQE
MRTTEARQLLPDAWGFICPIHTPDGAPCGLLNHLTMNCIVTKHPNAKLKAAIPTVLVDLG
MTPLPIADDWKNSYNVMLDGKLIGLIEDKIINKVVYELRLRKIKGKEIPSTLEIALVPKK
NVPAQYPGLFLFTSAARMMRPVINLAAQKIEYIGTFEQIYLDICVISQEVYEGMTTHQEI
SQTTIFSNLANLIPMPDCNQSPRNMYQCQMGKQTMGTPCHNWQQQSQTKLYRLQTPATPL
FRPVHYDNINMDDFAMGTNAIIAVISYTGYDMEDAMIINKSSYERGFGHGSIYKSEFVDL
NDKKSYFARDPAKPDLAKTIDVDGLPMIGIAIKEGDAYYSYYDADSAQYVIGKYKSAETA
YVDNVKLCGSLGNHDIRRACITFRIPRNPIVGDKFASRAGQKGILSRLYPIEDLPFTETG
MVPDIIFNPHGFPSRMTIAMMIEVMAGKSAAVHGLVHDATPFRFDEENTAIDYFGKLLEL
GGYNYYGTERMYSGIYGCELTANIFFGIVHYQRLRHMVSDKWQVRSTGPIDQLTRQPIKG
RRRGGGIRFGEMERDALISHGCSYLLQDRLFHCSDKITTLACQKCGSILGPELTVKSRID
DDDKKCRLCGEEDTVDEIEIPYIFKYLLIQLASCNINVKLKFRKV
NT seq 3378 nt   +upstreamnt  +downstreamnt
atgaatctttcgaatatgttggttgagcctaaattgacgaacacgtcaccaaatttcggc
agatcacccgatacacaaaacgagatattgcaatctctgggtacacctcatattgaatcc
tttaattacatgctggaagatggcctttatcaaaatttaaaggataacacgcctgtatat
gtaactcttcctaatagcgacaagatagttctttggctggacgatgtacatatctataag
cctgctgctcctactaatacaattggtttgaaatcatataaaatatatccatcggaatgt
cgacaaagaggtgtcacttacaagggtaagataattgccaggattggatggtccattaat
ggcaaagaacaggagattcttgagaaagatttgggagaggttccaatcatgctcaagtct
aatcggtgtcatttaaacaaaatgagccctaaggaattagtcgcacatggcgaacatgaa
caagaatggggtggatacttcataatcaaaggtttggagcgactcgtacgtatgctaata
atgacaaggcgaaactatcccatcgctgtcaagagaccaatttggaaaggtcgcggcgag
caattcagcgacttaggtattcttttgagaagcgttcgggatgacaactctaccgttaat
aataccctgcactatgtgaccgatggttctgcaaaatttgcgtttgcatacaaaaaagct
acatactatgtgccattaatactgatgttaaaatgtttgaaagatgtaactgacttatgc
atttataaagcattactcgctggatgcgaggatgatctttattacaataatagtatcatg
aatatgttacgtgctgtacatgaagagggcctacactggcacgaacaatgtaaagcatac
ataggaaagatgtttagagtaaagttttccgaattacctgaagatgcgactgatatagac
gtttgtgattacattgttaagaattgtgtcgctattcatcttgacgaacctgctgataaa
ttcgacttgcttgtatttatgaccaaaaaactgtttgccttttcaaataacaaatgcgcc
gttgagggtgtggactccgtgatgatgcaagaatgtttaatgggcgggcacttgtatcta
caggttctcaatgaaaaactgtgttcatggctggttggggttaagcatcatattctgaag
cgtgccaagagtgctggtaatagatacaccttaagtgtgcaggaaatgttgaatgttact
aagttacggtgcaacattgatgcacaaatggaatactttttgtccactggaagtataagg
tcatcttccggtttgggacttacgcaatcctctggtcttacgattgttgtggaaaatatc
aataggatgcgttatatgagtcattttcgtgcgatacacagaggcgcattctttcaagaa
atgagaactactgaagctagacaattgttgcctgatgcatggggatttatctgtccgatt
catacaccggacggtgctccatgcgggttgctcaaccacttgacaatgaattgtattgtt
acaaaacatccgaatgcaaaattgaaagccgcgatacctacagtactggttgacctcgga
atgactccgttacctatcgcagatgattggaaaaattcatataacgtaatgttggatggg
aaattgattggcttgattgaagacaaaattattaataaagtagtctacgaactgagatta
cgtaagataaagggtaaagaaataccatcaacactggagattgcattagttccaaagaaa
aatgttccagctcagtatccgggattgttcttatttactagcgcggctagaatgatgaga
ccggtgataaatctagctgcacaaaaaatcgagtatataggaacatttgaacaaatttat
ctggatatttgcgtgatttctcaagaagtttacgaagggatgacgactcatcaagagata
agccagacaacaatcttcagcaatttagctaatctcatcccgatgccggattgtaatcag
agtccaagaaatatgtaccaatgtcagatgggtaaacaaacaatgggtacaccgtgccac
aattggcaacaacagtcacaaacgaaattatatagactacaaacgcctgccacaccactt
tttaggccggtacattatgacaatattaacatggacgactttgcgatgggtaccaatgcg
ataattgctgttatctcatatacaggatacgatatggaagatgcaatgatcatcaacaag
tcgtcgtacgaacgtggcttcgggcatggatcgatttataaatctgaatttgttgatttg
aacgataaaaaaagttattttgctcgcgatccggctaaacctgaccttgcgaaaacaata
gatgttgacggtttgcctatgataggtattgctataaaagaaggagacgcgtactattcc
tattacgatgctgatagcgcccagtatgtcattggaaagtataaaagtgcagaaaccgct
tatgtcgacaacgtaaaactgtgtggctcgttaggcaatcatgatatccgaagagcgtgc
attacattccgtattcctaggaatcccattgttggagataaatttgcgtcaagagcggga
caaaaaggaattctctcgcgattatatcccatcgaggatttaccattcacggagaccgga
atggttcctgatattatattcaatccgcacggtttcccgagtcgtatgacaatcgctatg
atgattgaagtgatggccgggaaatcggcagctgtgcatggattggttcacgatgccaca
ccctttagatttgacgaagagaatacagccatagactacttcggaaaattattagaactc
ggtggttataattattatggaactgagagaatgtactcaggcatttatggatgcgagtta
actgccaacatcttctttggcattgtgcattatcaaagattgcgacatatggtctctgat
aagtggcaggtgagaagtactggaccgattgatcagctcacaagacaacccattaaaggt
cgtcgacgcggcggcggtattcgattcggagagatggaacgagacgctcttatttctcat
ggttgctcatatcttctccaagaccgtctctttcattgttctgataaaataacgacttta
gcgtgtcaaaagtgcggctcaatacttgggccagaattaacagtgaaaagtagaattgat
gacgacgataagaagtgccgtttgtgcggcgaagaagataccgtggacgaaattgaaatt
ccatatatctttaaatatcttttaatacagctagcatcctgcaatataaacgttaaattg
aaatttaggaaagtttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (65)   
   KEGG ORTHOLOGY (1)   
   RefGene (61)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (83)   

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